Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq31 91.5 4e-16 seq23 91.5 4e-16 seq15 91.5 4e-16 seq29 86.0 2e-14 seq33 77.0 8e-12 >seq31 Length=7180 Score = 91.5 bits (100), Expect = 4e-16 Identities = 186/271 (69%), Gaps = 9/271 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| ||||||| ||||||||| || | | |||||||| Sbjct 5069 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 5128 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| | Sbjct 5129 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 5188 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | | | || ||| || ||||| || | || | || | ||| ||| Sbjct 5189 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 5242 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245 || | ||| | ||| | |||| ||||||| ||||||| |||| |||| Sbjct 5243 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 5300 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | |||| ||||| ||||||||| |||||||| Sbjct 5301 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 5331 >seq23 Length=11911 Score = 91.5 bits (100), Expect = 4e-16 Identities = 186/271 (69%), Gaps = 9/271 (3%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| ||||||| ||||||||| || | | |||||||| Sbjct 614 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 673 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| | Sbjct 674 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 733 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | | | || ||| || ||||| || | || | || | ||| ||| Sbjct 734 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 787 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245 || | ||| | ||| | |||| ||||||| ||||||| |||| |||| Sbjct 788 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 845 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | |||| ||||| ||||||||| |||||||| Sbjct 846 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 876 >seq15 Length=24986 Score = 91.5 bits (100), Expect = 4e-16 Identities = 186/271 (69%), Gaps = 9/271 (3%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| ||||||| ||||||||| || | | |||||||| Sbjct 20637 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 20578 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| | Sbjct 20577 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 20518 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 || | | | || ||| || ||||| || | || | || | ||| ||| Sbjct 20517 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 20464 Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245 || | ||| | ||| | |||| ||||||| ||||||| |||| |||| Sbjct 20463 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 20406 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | |||| ||||| ||||||||| |||||||| Sbjct 20405 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 20375 >seq29 Length=9268 Score = 86.0 bits (94), Expect = 2e-14 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| ||||||| ||||||||| || | | |||||||| Sbjct 9068 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 9127 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| | Sbjct 9128 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 9187 Query 127 CC 128 || Sbjct 9188 CC 9189 >seq33 Length=5663 Score = 77.0 bits (84), Expect = 8e-12 Identities = 184/273 (67%), Gaps = 13/273 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||||| |||||||||| ||||||| ||||||||| || | | |||||||| Sbjct 946 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 887 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGAC-AAGGAATTTCGCTACCTTAGG 125 ||| ||||| ||||| |||||| | | ||| ||| || |||||||||||||| || Sbjct 886 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACCAATGAATTTCGCTACCTGAGA 827 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTA 184 ||| | | | || ||| || |||| ||| | | || | | | ||| | Sbjct 826 ACCCTCA-TCATAAGGCTGCTATTTA------CTTAAATTTAATAATATATCATTA---A 777 Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243 | | || | ||| | ||| | |||| ||||||| || |||| |||| ||| Sbjct 776 ATACTATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTAGACGTTAACTTATCG 717 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276 | | |||| ||||| ||||||||| |||||||| Sbjct 716 TTTATGCAAAGTGCGGTGTTTTTATTAAACAGT 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260799293952