Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07-
05] 56 sequences; 9,683,383 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq31 91.5 4e-16
seq23 91.5 4e-16
seq15 91.5 4e-16
seq29 86.0 2e-14
seq33 77.0 8e-12
>seq31
Length=7180
Score = 91.5 bits (100), Expect = 4e-16
Identities = 186/271 (69%), Gaps = 9/271 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| |||||||||| ||||||| ||||||||| || | | ||||||||
Sbjct 5069 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 5128
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| |
Sbjct 5129 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 5188
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | | | || ||| || ||||| || | || | || | ||| |||
Sbjct 5189 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 5242
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245
|| | ||| | ||| | |||| ||||||| ||||||| |||| ||||
Sbjct 5243 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 5300
Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276
| |||| ||||| ||||||||| ||||||||
Sbjct 5301 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 5331
>seq23
Length=11911
Score = 91.5 bits (100), Expect = 4e-16
Identities = 186/271 (69%), Gaps = 9/271 (3%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| |||||||||| ||||||| ||||||||| || | | ||||||||
Sbjct 614 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 673
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| |
Sbjct 674 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 733
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | | | || ||| || ||||| || | || | || | ||| |||
Sbjct 734 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 787
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245
|| | ||| | ||| | |||| ||||||| ||||||| |||| ||||
Sbjct 788 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 845
Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276
| |||| ||||| ||||||||| ||||||||
Sbjct 846 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 876
>seq15
Length=24986
Score = 91.5 bits (100), Expect = 4e-16
Identities = 186/271 (69%), Gaps = 9/271 (3%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| |||||||||| ||||||| ||||||||| || | | ||||||||
Sbjct 20637 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 20578
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| |
Sbjct 20577 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 20518
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186
|| | | | || ||| || ||||| || | || | || | ||| |||
Sbjct 20517 CCCTCA-TAATAAGGCTGCTATTTACTTAAATTT--AATAATA--TTATCATTAAATAA- 20464
Query 187 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTG 245
|| | ||| | ||| | |||| ||||||| ||||||| |||| ||||
Sbjct 20463 --TATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTATACGTTAACTTATCGTT 20406
Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276
| |||| ||||| ||||||||| ||||||||
Sbjct 20405 TATGCAAAGTGCGGTGTTTTTATTAAACAGT 20375
>seq29
Length=9268
Score = 86.0 bits (94), Expect = 2e-14
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| |||||||||| ||||||| ||||||||| || | | ||||||||
Sbjct 9068 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 9127
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||| ||||| ||||| |||||| | | ||| ||||| ||||||||||||||||| |
Sbjct 9128 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACAATGAATTTCGCTACCTTAGAA 9187
Query 127 CC 128
||
Sbjct 9188 CC 9189
>seq33
Length=5663
Score = 77.0 bits (84), Expect = 8e-12
Identities = 184/273 (67%), Gaps = 13/273 (5%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
||||| |||||||||| ||||||| ||||||||| || | | ||||||||
Sbjct 946 TACACAGCATCTTCACTGCGATTTTAATTTCACTTAGCTTAAAGGGGAGACAGTTGTTGT 887
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGAC-AAGGAATTTCGCTACCTTAGG 125
||| ||||| ||||| |||||| | | ||| ||| || |||||||||||||| ||
Sbjct 886 ATCATTACGTCATTCATGCAGGACCATAATTATTGGACCAATGAATTTCGCTACCTGAGA 827
Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGA-TCAAGAGCTTCGCGTTAGCTA 184
||| | | | || ||| || |||| ||| | | || | | | ||| |
Sbjct 826 ACCCTCA-TCATAAGGCTGCTATTTA------CTTAAATTTAATAATATATCATTA---A 777
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCG 243
| | || | ||| | ||| | |||| ||||||| || |||| |||| |||
Sbjct 776 ATACTATTATTTATATGTTAAGCATGGAGCAGAGTTCACACCTTAGACGTTAACTTATCG 717
Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGT 276
| | |||| ||||| ||||||||| ||||||||
Sbjct 716 TTTATGCAAAGTGCGGTGTTTTTATTAAACAGT 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260799293952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |