Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20delbrueckii_20[genbank_20GCA_5F002214845.1_202017-07- 05] 56 sequences; 9,683,383 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7 203 3e-47 seq4 123 2e-23 >seq7 Length=810710 Score = 203 bits (224), Expect = 3e-47 Identities = 567/859 (66%), Gaps = 16/859 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | ||| || || || |||| ||||| || | ||||| || ||||| ||| Sbjct 327229 GAGGCCAAGTTACAAACGGCAGTCTCATCAGGTGCTGAGTACTCAACGATTTCACAACAC 327288 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | ||| | | ||||| ||||| |||| ||| || ||||| ||| || ||||| Sbjct 327289 AAGTTAGAGGATTTAATGGTACCCAAGTTCTTTTGGTTGCTCTTTATATTACAGGCATCT 327348 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | |||| | ||||| || ||||| ||| || || | ||| |||| ||| || Sbjct 327349 TTGTAAAGCATGAATGGAGTACCAGTCTCTGTTTGAGATTCCAAGATAGCGTACCACAGT 327408 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTT-GCGTTCGTAATGTTCGTAGAGGT 66251 | || || | || | | | || | ||||| ||| ||||| |||| || | | Sbjct 327409 TTTTGAGCTTTGATAGT-CTTTCTACCACGACCTTCAGCGA-CGTAACGTTCATACAAGG 327466 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CACTTGTGTGGACACATC 66307 ||| || ||||| | || || |||| || |||| |||||| || | | | Sbjct 327467 CTTCAAATTCATCACCATAAACATCAGACAAACCTGGAGCTTCACTTG----GAGAGAAC 327522 Query 66308 AGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCG 66367 | | ||| ||||||| || || ||||| ||| || | ||| || ||||||||||| Sbjct 327523 AAAGTCCATTCACCATTCTCTTGAACACGTTTCATGAACAAATCTGGAATCCAGAGGGCT 327582 Query 66368 TAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAAC 66427 ||| | ||| | ||| || ||| || | ||||| || || || | || | ||| Sbjct 327583 GGGAACAAATCTCTTGCACGAATCTCTTCCTTACCGTGGTTCTTCCGGATATCTATGAAA 327642 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||||||||| || ||||||||||||| ||| | ||||| | || | |||| Sbjct 327643 TCAAAGATGTCTGCGTGCCATGGTTCCAAGTACAAAGCGAAAGCACCTGGCCTTTTGTTA 327702 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 |||||||| || || || ||||| |||||||||||||| | ||| || | | |||| Sbjct 327703 CCACCTTGATCCACATAACGAGCAGTGTTGTTGAAGACACGTACCATGGGGATCAACCCG 327762 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATT 66606 || || | || || || || | || || || ||| | || || | ||| | | Sbjct 327763 TTCGAAGTACCGTTAGTACCTGCAATATATGAACC-CGTAGAACGAATGTTGTGTATGTG 327821 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666 || |||||||||||| || ||||| || || |||||| || || || | | || Sbjct 327822 CAAACCAATACCACCAGCGGTCTTAGAAATCATAGCACATTCCTTCAAAGTATCGTAAAT 327881 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGG 66726 || || ||||||||| |||| |||| | ||| | |||||| | || || || Sbjct 327882 ACCCTCGATGGAGTCATCCTTCATGGCGATTAGGAAACATGAAGACATCTGAGGGCGTGG 327941 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA-GACATGTAAT 66785 || | || ||| || || || | ||| || | |||| || | | ||||| || Sbjct 327942 AGTACCAGCATTGAAAAGAGTTGGAGAAGCATGAATGAAGT-ATCTCAAGGACATCAGAT 328000 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCA 66845 | || ||||| || ||| || |||| || |||||||| || | ||| || ||| | Sbjct 328001 TATAAGTCTCAATAGCAGACTCGATGTCGTCACCATGAATACCAACAGCAACTCTCATAA 328060 Query 66846 GGAGGTATTGAGGCCGTTC 66864 | | |||||| ||||| Sbjct 328061 TCATATGTTGAGGACGTTC 328079 >seq4 Length=1065440 Score = 123 bits (136), Expect = 2e-23 Identities = 581/905 (64%), Gaps = 32/905 (4%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| ||| | ||||| ||| | || || | ||||| ||| | || | | Sbjct 811829 ATGAACCTCTACTAGTGGAGAACAAACGTAGATTTGTTCTATTCCCAATCAAATACCATG 811770 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | ||||||| ||| || | || || ||||| |||||||||| || ||| | ||| Sbjct 811769 AGATTTGGCAAGCGTATAAGAGAGCAGAGGCTTCGTTCTGGACGGCCGAAGAGATTGATC 811710 Query 61145 TGTCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATT 61200 |||| || || || |||| ||| | ||| | | ||| ||| | |||||| Sbjct 811709 TGTCGAAGGATATTCATGATTGGAATAACCGTATGAATGAGAAC-GAAAGATTTTTCATC 811651 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 | ||| ||||| |||||||| || || || ||||| || |||||||||||| | || Sbjct 811650 TCCCGTGTCTTGGCCTTCTTTGCTGCCTCTGATGGTATAGTAAATGAGAATTTAGTTGAG 811591 Query 61261 CGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 |||| | ||| || |||||| | | || || |||||||| || ||||| || Sbjct 811590 AATTTCAGTGCA-GAAGTGCAAATTCCAGAAGCTAAATGTTTCTATGGTTTCCAAATCAT 811532 Query 61320 CATGGAGAATGTCCACTCGGAGA--TGTACAGTGTTCTCATCGATACGTACATCAGGGAG 61377 ||||| || | ||||| |||| | | | ||| | || ||||| || |||| ||| Sbjct 811531 GATGGAAAACATTCACTCAGAGACCTATTCCCTGT--TAATTGATACTTATATCAAGGAT 811474 Query 61378 CGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA 61437 | |||| | || || |||||||| || || | || || | | || ||| Sbjct 811473 CCAAAGGAAAGCGATTTCTTATTCAATGCGATTGAAAACATTCCTCAGATTAAAGAGAAG 811414 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGC 61495 || || ||||| ||| ||||| ||| ||| | ||| || | || ||||| Sbjct 811413 GCCGAATGGGCTATCAGATGGAT--TCAGGACAGTGAATCTATCTTCGCAGAGAGATTGG 811356 Query 61496 TGGCATTTGCGGTGGTCGAGGGTGTAT--TTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | || || || | | || ||| | | |||||| || || ||||| || ||||| || Sbjct 811355 TTGCTTTCGCTGCCATTGAAGGTATTTTCTTTTCA--GGTTCCTTTGCTGCTATCTTCTG 811298 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 ||||||||| || || ||||| ||||| || || || || ||||| | | || Sbjct 811297 GTTGAAGAAGAAAGGTCTAATGCCAGGTCTAACGTTTTCTAACGAATTGATCTGCAGAGA 811238 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTC 61672 || || | ||| |||||||| | | ||||| ||| || || |||| | Sbjct 811237 TGAAGGTTTACATACCGATTTTGCATGTCTACTATT----TGCTCATTTGAAGAATAAGC 811182 Query 61673 C--GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG--AACAGGAA 61728 | || | | | | ||||| || ||| || || |||| || ||| | Sbjct 811181 CAGATCCTTCCA--TTATCGAAAAGATTATTACTGAAGCCGTCGAGATCGAAAAGAGGTA 811124 Query 61729 TTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAG 61788 ||| | || ||| | ||||| || | | || ||||| | || ||| ||| Sbjct 811123 CTTC--ATCGATGCTCTACCCGTTTCTTTATTGGGTATGAACGCCGACCTGATGAACCAG 811066 Query 61789 TATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAAT 61848 || |||| || || || || | || |||||| ||| || | ||| | | || Sbjct 811065 TACGTTGAGTTCGTCGCTGATAGACTACTGGTCGCTTTCGGGAACAAGAAATTTTTCAAC 811006 Query 61849 ACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTC 61908 || |||||||||||||||||||| | || ||||||| ||| ||||| ||||||||| Sbjct 811005 GTGACTAACCCATTTGATTTCATGGAGAACATCTCGCTGGCTGGTAAGACCAATTTTTTC 810946 Query 61909 GAGAA 61913 || || Sbjct 810945 GAAAA 810941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567728659840