Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torulaspora_20microellipsoides_20[genbank_20GCA_5F900186055.1_202017 -06-15] 46 sequences; 10,414,811 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq41 161 8e-35 seq27 138 9e-28 >seq41 Length=1599359 Score = 161 bits (178), Expect = 8e-35 Identities = 594/917 (65%), Gaps = 20/917 (2%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| ||||| ||||| | | | || || || || || ||| | ||| | | Sbjct 1219578 ATGAACCAATATTGGTGGAGAACAAACATAGATTTGTTTTATTTCCAATCAAATATCATG 1219519 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 | ||||||| ||||| | || |||||||| || ||||| | || || ||||| Sbjct 1219518 AAATTTGGCAAGCTTACAAGAGAGCAGAAGCTTCTTTTTGGACTGCTGAAGAAATCGATC 1219459 Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGG---TGAACAACATTTCATTA 61201 | || || || || |||| ||| | | | || || |||| | ||||||| Sbjct 1219458 TTTCAAAGGATATACATGATTGGAATAATAGAATGAACGAGAATGAAAGATTTTTCATTT 1219399 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 | || ||||| || || |||||||| || |||||||| ||||| ||||| | || Sbjct 1219398 CAAGGGTCTTGGCATTTTTCGCCGCTTCTGATGGTATCGTTAATGAAAATTTGGTAGAGA 1219339 Query 61262 GTTTCGC-GCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 |||| | |||| || | ||| | | || || ||||| || || || || ||| Sbjct 1219338 ATTTCTCAGCAGAAGTT-CAAATTCCTGAAGCCAAGTGTTTTTATGGGTTTCAAATTATG 1219280 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 ||||| ||| | || || |||| ||| | | || |||||||| || |||| || | Sbjct 1219279 ATGGAAAATATTCATTCTGAGACTTACTCTTTACTGATCGATACTTATATCAAAGACCCA 1219220 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 |||| |||| ||||||||||| ||||| | || || | || ||||| Sbjct 1219219 AAGGAAAGTGATTTCTTGTTCAATGCTATCGATAATATTCCACAAATTAAAGAAAAAGCA 1219160 Query 61441 GATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGATTGCTGGC 61499 || ||||| | | ||||| | || || | || | || | |||| |||| | || Sbjct 1219159 GAATGGGCAATTAGATGGATT-CAAGATAGCAATGCAATTTTCGCTGAAAGATTAGTTGC 1219101 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 |||||| | | || ||| | || ||| ||| || ||||| || ||||||||||| || Sbjct 1219100 ATTTGCTGCAATTGAAGGTATTTTCTTCTCTGGTTCCTTTGCTGCTATCTTTTGGTTAAA 1219041 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||| || | ||||| ||| ||||||| ||||||||||| | | || || || Sbjct 1219040 GAAGAAGGGTTTAATGCCTGGTTTGACCTTTTCAAATGAGTTGATTTGCAGAGATGAAGG 1218981 Query 61620 CATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCT-ATCTGGTGAATCGTCCGTCGG 61678 | ||| ||||||||| |||| |||| |||| || || ||| || | Sbjct 1218980 TTTACATACAGATTTTGCTTGTTTGTTATT----CGCTCATTTGAAAAATAAACC--AGA 1218927 Query 61679 AGGAGC--GTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 | | | | | | ||||| | || || || || ||| | || | | | Sbjct 1218926 ACCATCAATTATAGAAAAGATTATCACCGAAGCTGTTGAAATTGAAAAAAGATATTTCAT 1218867 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || |||||||| || || | | || |||||| | |||||| || || |||| Sbjct 1218866 GGATGCTTTGCCAGTATCGTTATTGGGTATGAATGCCGATCTAATGAACCAATACGTTGA 1218807 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG--AAA 61854 |||||| || || | || || |||| ||| |||| || | | | | | ||| | | Sbjct 1218806 ATTTGTCGCTGATAGACTATTAGTCGCTTTAGGTAACAAAAAG-TATTTCA-ACGTTACA 1218749 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 || ||||||||||||||||| | ||||| ||| ||| ||||| || || |||||||| Sbjct 1218748 AATCCATTTGATTTCATGGAAAACATTTCATTGGCTGGTAAGACTAACTTCTTCGAGAAG 1218689 Query 61915 CGTGTAGGCGACTATCA 61931 | || ||| ||||| Sbjct 1218688 AGAGTTTCCGATTATCA 1218672 >seq27 Length=921605 Score = 138 bits (152), Expect = 9e-28 Identities = 423/646 (65%), Gaps = 10/646 (2%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 |||| || || || || || ||||| |||| || ||||| | || || |||||||| Sbjct 395027 GCAATGGAAGCTAGATTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCTACAATTTCA 395086 Query 66068 GTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGC 66125 || | ||| | || | || || || ||||||| || |||||||| || | Sbjct 395087 CAACATAAGTTA--GAAGATTTGATAGTACCTAAATTCTTCTGGTTACTCTTCGTGTTAC 395144 Query 66126 ATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGT 66185 | |||||||| || | |||| | || || || || ||| ||| | ||| | |||||||| Sbjct 395145 AAGCATCCTTATATAGCATGAATGGGGTACCAGTTTCAGTTTGAGCCTCCAAGATGGCGT 395204 Query 66186 GCCAAAGAGCGCGTGCCTTCACCGTACGT--ACCGCCCTACCTTTGCGTTCGTAATGTTC 66243 ||| | | || || | || | ||||| ||| ||| ||||| |||| Sbjct 395205 ACCACAATTTCTGGGCTTTAATGGTTTTTCTACCGCGAC-CCTCTGCAA-CGTAACGTTC 395262 Query 66244 GTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT-GGAC 66302 ||| | | |||||| ||| | | || || | | || ||| | ||| | ||| Sbjct 395263 GTATAACTCTTCGAACTCTTCGGCATAAACATCAGCTAAACCTGG-CGCTTCACTTGGAG 395321 Query 66303 ACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGA 66362 | | || | ||| ||||| | | || ||||| ||| |||| |||||| ||||| | Sbjct 395322 AAAACAAGGTCCACTCACCGTTTTCTTGGACACGTTTCATGAATAAATCAGGAATCCAAA 395381 Query 66363 GGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGA 66422 | || || | ||| | || || || || | ||||||||||| | | || | Sbjct 395382 GTGCTGGAAATAAATCTCTGGCACGAATTTCTTCCTTACCGTGATTTTTTCTAATATCAA 395441 Query 66423 GGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTT 66482 ||| || || ||||| |||||||||||||| ||||| | || || | ||| | || Sbjct 395442 TGAAATCGAAAATGTCTGCATGCCATGGTTCAAGGTATAAAGCAAAAGCGCCTGGTCTTT 395501 Query 66483 TGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGA 66542 || |||||||||||||| || ||||| |||||| ||||| || | ||| || | | Sbjct 395502 TGTTACCACCTTGGTCGACATAACGAGCAGTATTGTTAAAGACTCGAATCATGGGGATTA 395561 Query 66543 GCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAA 66602 |||||||| | ||||| || || | ||| ||| || | || || | || | Sbjct 395562 AACCGTTAGAGGTACCATTAGTACCTGCAATGTAGGAACCGGTAGAACGAATGTTATGGA 395621 Query 66603 CATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || ||||||||||| || || || || || |||||| || Sbjct 395622 TATGTAGCCCAATACCACCAGCAGTTTTGGAAATCATAGCACATTC 395667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567777113440