Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamia_20fluorescens_20[genbank_20GCA_5F001599155.1_202016-03-
01] 20 sequences; 13,178,500 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 224 8e-54
>seq1
Length=2974285
Score = 224 bits (248), Expect = 8e-54
Identities = 604/915 (66%), Gaps = 14/915 (2%)
Strand=Plus/Plus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
|||| || || ||| | ||||| |||||||||| || | ||||| || | || | |
Sbjct 232409 ATGAGCCTCTTTTGAAGGAGAACACTCGTCGTTTTGTTCTTTTCCCTATTAAATACCACG 232468
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
| ||||||| |||||||| || || ||||| || || ||||| | ||||| ||||||
Sbjct 232469 AGATTTGGCAAATGTACAAGAAAGCAGAAGCATCTTTTTGGACTGCAGAGGAAATCGATT 232528
Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTC---ATTA 61201
|| ||||||| |||||||| | | | || || | | | |||| |||
Sbjct 232529 TGGGAAAAGACACTCATGACTGGAACAATCGCTTGAACGACAACGAGCGTTTCTTCATTT 232588
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
| | | ||||| || || || ||||| || ||||| || || ||||| || ||||
Sbjct 232589 CCCGTATTTTGGCATTTTTCGCTGCTTCCGATGGTATTGTTAACGAGAACTTGGTGGAGA 232648
Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| | ||||| || | | || || || || ||||| ||||| || |
Sbjct 232649 ACTTCTCTGCCGAGGTTCAGATTCCAGAAGCCAAATGCTTTTACGGTTTCCAAATCATGA 232708
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
|||| ||| ||||||| |||| ||| | | ||||| || || |||| ||| |
Sbjct 232709 TGGAAAATATCCACTCAGAGACCTACTCCTTGTTGATCGACACCTATATCAAGGACCCCA 232768
Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441
||| || || |||||||| || ||||| || || | || ||| || |
Sbjct 232769 AGGAGGCAGACTTTTTATTCAATGCTATTGAGACTATTCCTTGCATCAAAAAGAAGGCTG 232828
Query 61442 ATTGGGCCTTCAATTGGATCACCAGT-ACAACGGCTACATTTGGTGAACGATTGCTGGCA 61500
| ||||| || ||||||| | || | | || |||||| ||||| | | |||
Sbjct 232829 ACTGGGCTTTACGCTGGATCAGTGATGACGAGGCCTT-ATTTGGCGAACGTCTTGTTGCA 232887
Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560
||||| | || || ||| | || ||||||||||||||||| | |||||||||||||||
Sbjct 232888 TTTGCTGCTGTTGAAGGTATTTTCTTCAGTGGATCGTTTGCATCCATCTTTTGGTTGAAG 232947
Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620
|| | || | ||||| ||| |||| ||| ||| ||||| || | || || |||||
Sbjct 232948 AAGAGAGGCTTGATGCCTGGTTTGACTTTCTCCAACGAGTTAATCTGCCGTGATGAGGGT 233007
Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAG 61680
|||| ||||||||| ||| ||||| | || || || | || || |
Sbjct 233008 TTGCACACCGATTTTGCTTGCTTGTTATTCTCCCACT---TGCAAAACAGACC--CGATG 233062
Query 61681 GAGC--GTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738
|| ||| | ||||| | ||||| || |||| ||| |||| ||| | ||||
Sbjct 233063 CTGCTATTGTCGAGAAGATTATCACAGAGGCCGTTGCTATTGAAAAGGAGTTTTTCACTG 233122
Query 61739 ACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAAT 61798
| |||||||| | || | | || ||||| ||| | | |||| ||||| | || |
Sbjct 233123 ATGCTTTGCCTATTTCGTTGTTGGGTATGAACTGTAAATTGATGTGCCAGTACGTGGAGT 233182
Query 61799 TTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857
||||||||||| | | | |||| ||| || | ||| || | || ||| | ||
Sbjct 233183 TTGTTGCCGACAGATTACTTGTCGCATTAGGCAACGAAAAGG-TTTACAATGTTACTAAT 233241
Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917
|| ||||| || ||||| | |||||| ||| || ||||| || |||||||| || |
Sbjct 233242 CCCTTTGACTTTATGGAAAACATTTCGTTGGCAGGAAAGACCAACTTTTTCGAAAAGAGA 233301
Query 61918 GTAGGCGACTATCAA 61932
|| | ||||| |||
Sbjct 233302 GTTAGTGACTACCAA 233316
Score = 118 bits (130), Expect = 8e-22
Identities = 422/651 (65%), Gaps = 14/651 (2%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
|||||| |||||| || | |||||| | ||| || ||||| | ||| || || | ||
Sbjct 199993 ACAAACGAGGGAAGTGCGATAGATGCCAAGTTACATACAGCAACCTCATCTGGCGAGGAG 199934
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGAT 66110
|| ||||||||||| |||| ||| | || | ||| ||||| |||| |||||
Sbjct 199933 TATTCGACAATTTCACAACACAAATTG--GAAGATTTGATGACACCCAAGTTCTTTTGAT 199876
Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170
|| | || |||||||||||| ||||||| |||| | || || ||||| || ||| |
Sbjct 199875 TAGTTTTTTTATTGCATGCATCTTTGTACAACATGAATGGGGTACCGGTTTCGGTTTGCG 199816
Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTG 66229
||| | ||||||| ||| | | ||||| | || | | | || | ||
Sbjct 199815 CCTCCAAAATGGCGTACCATAATTTCTGAGCCTTGATAGT-CTTTCTTCCACGGTTTTCA 199757
Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289
|||||||| | ||||| | || || ||||| | || ||||||| || | |
Sbjct 199756 CGTTCGTACTTCTCGTACAATGCCTCAAACTCATCACCGTAAACATCGGACAAACCTTGG 199697
Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349
|| | ||| | | || | ||| ||| ||| ||| || || | |||||| |
Sbjct 199696 GCCTCATTAGGAGAGAACAAGGTCCACTCAGCATTCTGCTCAACTCTCTTCATAAACAAG 199637
Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG--CTCGTTGCTCCTCAATGCCGTGAT 66407
||||| ||||| | || ||| | ||| | || ||| || || || | || ||||
Sbjct 199636 TCAGGAATCCACAATGCTGGGAACAAATCTCTTGCCCTCATT--TCTTCCTTACCATGAT 199579
Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467
| || | | |||| ||| |||||||| || || ||||||||||||| || | ||| |
Sbjct 199578 TCTTTCTAATATCGATGAAATCAAAGATATCCGCGTGCCATGGTTCCAAATATAAGGCAA 199519
Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACAC 66527
| | || | || ||||| || || ||||| ||||| || ||||| || |
Sbjct 199518 ATGCACCGGGTCTCTTATTACCACCCTGATCCACGTAACGAGCAGTGTTATTGAAAACTC 199459
Query 66528 GCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCC--TCG 66585
| ||| || | || || ||||| | || ||||| || | ||| || || |||
Sbjct 199458 TAACCATAGGAATGATACCATTAGAGGTACCGTTGGTACCAGCAATGTAGGCACCAGTCG 199399
Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
| || || | ||| | | | ||||||||| || || |||| || ||
Sbjct 199398 AG--CGAATGTTGTGTATGTGTAAACCAATACCTCCAGCACTCTTGGAAAT 199350
Score = 116 bits (128), Expect = 3e-21
Identities = 317/481 (66%), Gaps = 6/481 (1%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| || ||||| ||||| ||| | || |||| ||| || | |||||||| || ||
Sbjct 200896 TCTACTGTGAATTGGATGGCAGCCGAGGCAGCCTGGGTTCTCAAGTAGTACATACCTGTT 200837
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
||||| || |||| | || ||||||||||| | |||||| | | || ||
Sbjct 200836 TTGAGTCCCTTCTTCCAACCGTAAAAATGCATCGAGGTTAATTTACCCATTGTAGGATCC 200777
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257
| || || ||||| ||||| ||||| ||| | |||| |||||||||||
Sbjct 200776 TTGATGTGGATGTTCAAAGACTGGGATTGATCAATGAAGGCGGCACGGTCTGCAGCCATA 200717
Query 65258 TCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAAT 65316
||||| || | || || ||||| ||||||||||||| || | | || ||
Sbjct 200716 TCAATAATGTGTTTCTGAGAGATTTCCCATACGGTCTTGTACAA-CGCCTTGACTTCGTC 200658
Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCATC 65374
|| || | | ||||| ||||| | || | ||| ||| || |||
Sbjct 200657 AGGGATGTTGGGCAACAGCTGGATCGAACC--GTTGTTGGAAATGATGTTGTTCTTCATG 200600
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434
|| || ||| | ||||||||| | ||||| | | ||| | | | |||| | ||||
Sbjct 200599 GAGTCGTTCCAGATACCCAAATCCACAAGATCGCGTAACAAATAAGGGTTGACAATTTGG 200540
Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494
|| || || | || ||| | | | ||||| ||||| ||| |||||||||| | ||
Sbjct 200539 AATTCACCAGCCAATACTCTTCTGGAGTAGATATTGGAAGTGTAGGGTTCAAAGCACTCG 200480
Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554
|||| || | ||||||| ||| ||||| || ||||||||||| ||||| || || |||
Sbjct 200479 TTGTTACCCAATATTTGGGAAGTGGATGCCGTGGGCATGGGAGCAACCAATAACGAATTT 200420
Query 65555 C 65555
|
Sbjct 200419 C 200419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567903092800
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