Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 619 5e-175 seq3 618 2e-174 >seq1 Length=3734243 Score = 619 bits (686), Expect = 5e-175 Identities = 539/658 (82%), Gaps = 19/658 (3%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| || Sbjct 933968 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGC 934027 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 934028 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 934087 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || ||||||||| ||| || |||||||||||||||| ||||| | ||| | |||||| Sbjct 934088 TGAAAAGAGAGTGAAATAGAACGTGAAATTGTTGAAGTGGAAGGGTTTGAAGTTAGACTT 934147 Query 215 GCCCGCAGTT---GCTCAACCGGCCCCTCGGCCG-GTGCACTCTTCTGCGGTCAGGCCAG 270 | |||||| |||| || || || |||| ||| |||| | | | | | |||||| Sbjct 934148 G---GCAGTTTACGCTCCAC-GGTCCTTCGGGGTTGTGTACTCGTTTTCTGCCGGGCCAG 934203 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 |||||| | | | | | |||| | || || ||| || ||| | ||| |||| Sbjct 934204 CATCAGTTTTGATAGAAGTACAAAGACATTGG-AACGTG-CCTTCTTATGTTGGT-TTAT 934260 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG-GCTAGGATGCTGG 389 || | | | ||||| | | | ||||||||| ||||||| ||||||||||||| Sbjct 934261 AGACTTTGTT--AATGCTTCTCATCGGGACTGAGGACCGCGCTTTTTGCTAGGATGCTGG 934318 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 | ||||| || || | ||||||||| |||||||||||||||||||| |||||||| Sbjct 934319 CRTAATGATTTCAAACCACCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTATGCGA 934378 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT---- 505 |||||||||||| |||||||| ||||||||||||||||||| |||| || ||| | Sbjct 934379 GTGTTTGGGTGTWAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGACCTCTTTTT 934438 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| |||| |||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 934439 GAGGC-GCACAATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATAGTTG 934497 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 934498 ATGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 934557 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 934558 GGAAGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 934615 Score = 618 bits (684), Expect = 2e-174 Identities = 539/658 (82%), Gaps = 19/658 (3%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| || Sbjct 2001725 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGC 2001666 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 2001665 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 2001606 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || ||||||||| ||| || |||||||||||||||| ||||| | ||| | |||||| Sbjct 2001605 TGAAAAGAGAGTGAAATAGAACGTGAAATTGTTGAAGTGGAAGGGTTTGAAGTTAGACTT 2001546 Query 215 GCCCGCAGTT---GCTCAACCGGCCCCTCGGC-CGGTGCACTCTTCTGCGGTCAGGCCAG 270 | | |||| |||| || | || |||| | ||| |||| | | | | | |||||| Sbjct 2001545 G---GTAGTTTACGCTCCAC-GATCCTTCGGGGCCGTGTACTCGTTTTCTGCCGGGCCAG 2001490 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 |||||| | | | | | |||| | || || ||| || ||| | ||| |||| Sbjct 2001489 CATCAGTTTTGATAGAAGTACAAAGACATTGG-AACGTG-CCTTCTTATGTTGGT-TTAT 2001433 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG-GCTAGGATGCTGG 389 || | | | ||||| | | | ||||||||| ||||||| ||||||||||||| Sbjct 2001432 AGACTTTGTT--AATGCTTCTCATCGGGACTGAGGACCGCGCTTTTTGCTAGGATGCTGG 2001375 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 ||||||| || || | ||||||||| |||||||||||||||||||| |||||||| Sbjct 2001374 CGTAATGATTTCAAACCACCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTATGCGA 2001315 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT---- 505 |||||||||||| |||||||| ||||||||||||||||||| |||| || ||| | Sbjct 2001314 GTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGACCTCTTTTT 2001255 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| |||| |||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 2001254 GAGGC-GCACAATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATAGTTG 2001196 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2001195 ATGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 2001136 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2001135 GGAAGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2001078 Score = 605 bits (670), Expect = 1e-170 Identities = 536/658 (81%), Gaps = 19/658 (3%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| || Sbjct 3591638 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGC 3591579 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 3591578 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 3591519 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || ||||||||| ||| || |||||||||||||||| ||||| | ||| | |||||| Sbjct 3591518 TGAAAAGAGAGTGAAATAGAACGTGAAATTGTTGAAGTGGAAGGGTTTGAAGTTAGACTT 3591459 Query 215 GCCCGCAGTT---GCTCAACCGGCCCCTCGGCCG-GTGCACTCTTCTGCGGTCAGGCCAG 270 | | |||| |||| || | || |||| ||| |||| | | | | | |||||| Sbjct 3591458 G---GTAGTTTACGCTCCAC-GATCCTTCGGGGTCGTGTACTCGTTTTCTGCCGGGCCAG 3591403 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 |||||| | | | | | |||| | || || ||| || ||| | ||| |||| Sbjct 3591402 CATCAGTTTTGATAGAAGTACAAAGACATTGG-AACGTG-CCTTCTTATGTTGGT-TTAT 3591346 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG-GCTAGGATGCTGG 389 || | | | ||||| | | | ||||||||| ||||||| ||||||||||||| Sbjct 3591345 AGACTTTGTT--AATGCTTCTCATCGGGACTGAGGACCGCGCTTTTTGCTAGGATGCTGG 3591288 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 | ||||| || || | ||||||||| |||||||||||||||||||| |||||||| Sbjct 3591287 CATAATGATTTCAAACCACCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTATGCGA 3591228 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT---- 505 |||||||||||| |||||||| ||||||||||||||||||| |||| || ||| | Sbjct 3591227 GTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGACCTCTTTTT 3591168 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| |||| |||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct 3591167 GAGGC-GCACAATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGATCATAGTTG 3591109 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3591108 ATGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 3591049 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3591048 GGAAGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 3590991 >seq3 Length=2099697 Score = 618 bits (684), Expect = 2e-174 Identities = 538/658 (82%), Gaps = 19/658 (3%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| || Sbjct 942810 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGC 942869 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 942870 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGCACTT 942929 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 || ||||||||| ||| || |||||||||||||||| ||||| | ||| | |||||| Sbjct 942930 TGAAAAGAGAGTGAAATAGAACGTGAAATTGTTGAAGTGGAAGGGTTTGAAGTTAGACTT 942989 Query 215 GCCCGCAGTT---GCTCAACCGGCCCCTCGGCCG-GTGCACTCTTCTGCGGTCAGGCCAG 270 | | |||| |||| || || || |||| ||| |||| | | | | | |||||| Sbjct 942990 G---GYAGTTTACGCTCCAC-GGTCCTTCGGGGTYGTGTACTCGTTTTCTGCCGGGCCAG 943045 Query 271 CATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTAT 330 |||||| | | | | | |||| | || || ||| || ||| | ||| |||| Sbjct 943046 CATCAGTTTTGATAGAAGTACAAAGACATTGG-AACGTG-CCTTCTTATGTTGGT-TTAT 943102 Query 331 AGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG-GCTAGGATGCTGG 389 || | | | ||||| | | | ||||||||| ||||||| ||||||||||||| Sbjct 943103 AGACTTTGTT--AATGCTTCTCATCGGGACTGAGGACCGCGCTTTTTGCTAGGATGCTGG 943160 Query 390 CGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 | ||||| || || | ||||||||| |||||||||||||||||||| |||||||| Sbjct 943161 CRTAATGATTTCAAACCACCCGTCTTGAAACACGGACCAAGGAGTCTATTGCCTATGCGA 943220 Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT---- 505 |||||||||||| |||||||| ||||||||||||||||||| |||| || ||| | Sbjct 943221 GTGTTTGGGTGTWAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGACCTCTTTTT 943280 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||| |||| |||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 943281 GAGGC-GCACAATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTAAGAGCATAGTTG 943339 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 943340 ATGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 943399 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 943400 GGAAGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 943457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999914200