Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 713 0.0 seq1 84.2 7e-14 >seq3 Length=2099697 Score = 713 bits (790), Expect = 0.0 Identities = 464/504 (92%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||||||||| | || |||||||||| |||||||||||||||||| Sbjct 2065813 GTTCTCATTCCAATTACAAGACC--ATAG-GCCCTGTATCGTTATTTATTGTCACTACCT 2065869 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2065870 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2065929 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2065930 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTACCATGGTA 2065989 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 2065990 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCGCCAGCA 2066049 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||||||| |||| ||||||| |||||||||||| || |||||| || ||||| Sbjct 2066050 CGAGGCCATGCGCTTCGACAAGTTATCATGAATCACCAA-AAGGCCCGAA-AGCATTGGT 2066107 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| ||| | |||| |||| ||||||||||||||||| Sbjct 2066108 TTTTTATCTAATAAATACATCCC------AAACGGGATTTTACGCATGTATTAGCTCTAG 2066161 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2066162 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 2066221 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2066222 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2066281 Query 481 AGACAAGCATATGACTACTGGCAG 504 | ||||||||| | ||||||||| Sbjct 2066282 ATGCAAGCATAT-ATTACTGGCAG 2066304 Score = 710 bits (786), Expect = 0.0 Identities = 462/504 (92%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||||||||| | || |||||||||| |||||||||||||||||| Sbjct 940863 GTTCTCATTCCAATTACAAGACC--ATAG-GCCCTGTATCGTTATTTATTGTCACTACCT 940807 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940806 CCCTKTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 940747 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 940746 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCTACCATGGTA 940687 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 940686 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCAGCGCCAGCA 940627 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 | |||||||||| |||| ||||||| |||||||||||| || |||||| || ||||| Sbjct 940626 CGAGGCCATGCGCTTCGACAAGTTATCATGAATCACCAA-AAGGCCCGAA-RGCATTGGT 940569 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| ||| | |||| |||| ||||||||||||||||| Sbjct 940568 TTTTTATCTAATAAATACATCCC------AAACGGGATTTTACGCATGTATTAGCTCTAG 940515 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940514 AATTACMACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 940455 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940454 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 940395 Query 481 AGACAAGCATATGACTACTGGCAG 504 | ||||||||| | ||||||||| Sbjct 940394 ATGCAAGCATAT-ATTACTGGCAG 940372 >seq1 Length=3734243 Score = 84.2 bits (92), Expect = 7e-14 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 447 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| Sbjct 1919125 TGCTTATACTTAGACATGCATGGCTTAATCTTTGATGCAAGCATAT-ATTACTGGCAG 1919069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399939584