Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 232 5e-56 seq3 167 2e-36 >seq1 Length=3734243 Score = 232 bits (256), Expect = 5e-56 Identities = 610/920 (66%), Gaps = 22/920 (2%) Strand=Plus/Plus Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 || || ||||| || || | ||| || || || |||||| ||| ||| |||||| | Sbjct 741336 TATATTGTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAA 741395 Query 65795 CCCATCAGGACAAAA-GTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 | | || | | || |||||||||| |||||| || |||| | | || || ||||| || Sbjct 741396 CGTAG-AGCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCG 741454 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || || || || | |||||||| ||||||||||| || | || ||||||| || | Sbjct 741455 CATGTTTGAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAG 741514 Query 65914 ATTGCG---TGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 || || | ||| | ||| | | || ||| |||| | | | || Sbjct 741515 GTTCCGAACTAGAACCTTAGCCACATCATGGAGCT-TTG--CGAAGTTATAGAGTACTCC 741571 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 || |||| | ||| || | ||||||| || | || || | |||||| || Sbjct 741572 ACCATCGCGC-TGCTCGAGGTAGC-----TGGGAAGAGCGATTGAGGCCAAGTTGCAAAC 741625 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT---ACTGCAGCG 66087 ||| | ||||| || | |||||||||| ||| ||| ||||| ||| | Sbjct 741626 AGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTG-- 741683 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 || || ||||| |||| ||| ||| ||| |||||| ||||||||||| | ||| || Sbjct 741684 -ATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATA 741742 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 |||| | || |||||| ||||| |||| || |||| ||| || ||||||| | Sbjct 741743 CGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGAT 741802 Query 66208 CGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 ||||| || || | | | || | ||||| | | ||| || | ||||| |||| Sbjct 741803 GGTACG-ACGACCTTTACCTAGCTTCTCGTACTTTGTGTACAGCTCCTCGAATTCGTCAC 741861 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 | | || |||| |||| ||||| | | ||||||||| || | |||||| ||||||| Sbjct 741862 CATACACGTCGGCTAGACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCT 741921 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 || || || ||| || | ||| || ||||| || || ||| | ||| || || | Sbjct 741922 CTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCAC 741981 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | |||||| | || |||||||| ||||| || | |||||||| | ||| |||||| Sbjct 741982 GAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCC 742041 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | || || | || || ||||| | ||| || || ||| ||||| || ||||| | Sbjct 742042 ACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATC 742101 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 |||| ||| ||| | ||||||||||| || | | || || | || || || | Sbjct 742102 GAGCTGTATTATTGTACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTC 742161 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 | | || || ||| || || || | ||||| ||| ||||||||||| || || | Sbjct 742162 CAGCAATATATGAGCCTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAG 742221 Query 66627 TCTTCGAGATGGCAGCACAA 66646 ||| |||||| |||||| Sbjct 742222 ACTTAGAGATGAGCGCACAA 742241 >seq3 Length=2099697 Score = 167 bits (184), Expect = 2e-36 Identities = 587/905 (65%), Gaps = 24/905 (3%) Strand=Plus/Plus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 || || || ||| | ||||| || |||| || ||| | || || ||| ||| | || Sbjct 1027328 GAGCCTCTTTTGAAGGAGAACCCGGGTCGCTTTGTACTATTTCCTATCAGGTACCATGAA 1027387 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| ||| || || ||||| || || |||||||| | || ||| | ||| | Sbjct 1027388 ATTTGGCAGGCGTATAAGAAAGCGGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTC 1027447 Query 61147 TCCAAAGACATGAATGACTGGG---AGCG-TTTATCGAGCGGTGAACAACATTTCATTAA 61202 || || |||||||||||| | || | | | || | ||| | | |||||| Sbjct 1027448 GGTAAGGATTTGAATGACTGGGACAATCGCATGAACAAG-GATGAGCGATTCTTCATTTC 1027506 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 |||| | || || || || || || ||||| || ||||| ||||| | | || || Sbjct 1027507 GAATGTACTCGCATTTTTCGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGAGCG 1027566 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | || |||||| | | ||||| ||||| || || ||||| || || Sbjct 1027567 GTTCTCTGGTGAAGTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCATGAT 1027626 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG-- 61380 ||||||| | |||||||||| ||| | || || || || || || | ||| | | Sbjct 1027627 GGAGAATATTCACTCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAA 1027686 Query 61381 -GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAA-- 61437 | || || | | ||||||||||||| ||||| || || | | || ||| Sbjct 1027687 AGAGGCAC---AGCACCTGTTCAATGCCATTGAGACCATTCC--CTGCATTGCTAAAAAG 1027741 Query 61438 GCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 || | ||||| || ||||||| | | | ||||||| || || | || Sbjct 1027742 GCTAAGTGGGCGTTGCGCTGGATCAGTGATCGCGAGTCCACATTTGCAGAGCGCCTTGTG 1027801 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || ||||| | || ||| || || || || ||||| ||| | Sbjct 1027802 GCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTA 1027861 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| || || || ||||| ||||| || || |||||| | || || ||||| || Sbjct 1027862 AAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAA 1027921 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || |||||| |||||||||| | | ||| |||| | || | || || |||||| Sbjct 1027922 GGTATGCATACTGATTTTGCTTGCCTCTTGTTC--ACGC-ACCTTGAAAACCGCCCGTCG 1027978 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACT 61737 ||| | | |||| | ||||||||| ||||| ||||||| || ||| Sbjct 1027979 CGTGAGATCATCGAGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACT 1028038 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || | ||||| || || | ||||||||| || |||| ||||| ||||| Sbjct 1028039 GATGCGCTCCCCGTATCTCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAG 1028098 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTAT--GAAGCGGATCTATAATACGAAA 61854 || ||||||||||| || | || | | |||| || ||| | | | || Sbjct 1028099 TTCGTTGCCGACCGCTTGCTCGTGGCTCTTGGCCATCCCAAGGTGTACAGCGTTGCG--- 1028155 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 ||||| |||||||||||||| | || ||||| | || ||||| || || || ||||| Sbjct 1028156 AACCCCTTTGATTTCATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAG 1028215 Query 61915 CGTGT 61919 || || Sbjct 1028216 CGAGT 1028220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567980618560