Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yamadazyma_20sp._20MH-2017a_20[genbank_20GCA_5F002109505.1_202017- 04-25] 191 sequences; 10,912,061 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq103 187 2e-42 seq147 116 3e-21 >seq103 Length=1665694 Score = 187 bits (206), Expect = 2e-42 Identities = 399/589 (68%), Gaps = 13/589 (2%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| |||||||| ||| |||| | || ||||||| |||||||||||||| ||||| Sbjct 214469 TTCGTCTTGTTCCCAATCAAGTACCATGAGATTTGGCAAATGTACAAAAAGGCTGAAGCC 214528 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 || || ||||| | ||||| |||| ||| ||||| | |||||||| | Sbjct 214529 TCTTTTTGGACTGCTGAGGAAATCGACTTGGGTAAAGATACTCATGACTGGAACAACAAG 214588 Query 61177 TCGAGCGGTGAACAACA-----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGG 61231 | || || | ||| | | ||| || | | | ||||| ||||| || || || | Sbjct 214589 TTGAACGAT-AACGAAAGGTTTTTTGTTTCCAGAATT-TTGGCTTTCTTCGCTGCCTCTG 214646 Query 61232 ACGGTATCGTCAATGAGAA-TTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 | |||||||||||||| || || ||| || ||| || || || |||||| | || Sbjct 214647 ATGGTATCGTCAATGAAAACTTGGTTGAAAACTTTTCTGC-CGAAGTTCAAGTGCCTGAA 214705 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 || ||||||||||| ||||| || ||||| || ||||||| || | ||| | Sbjct 214706 GCCAAGTGTTTCTACGGTTTCCAAATCATGATGGAAAACATCCACTCCGAAACCTACTCT 214765 Query 61351 GTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATC 61410 | | ||||| | ||||||| ||| | |||| ||| |||||||| || ||| Sbjct 214766 TTGTTGATCGACTCATACATCAAGGATCCAAAGGAAGCTGACTTCTTGTTCAACGCTATC 214825 Query 61411 GAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACA 61470 || || || || | ||| | ||||| || ||||| || | ||||| | | | | Sbjct 214826 GAAACCATTCCACAAATTAAGAGAAAAGCTGACTGGGCTTTGAGATGGATTA--ATGATA 214883 Query 61471 ACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCA 61528 ||| ||| || |||||| |||| | || || || | || || ||| | || || | Sbjct 214884 ACGATGCTTTGTTCGGTGAAAGATTAGTCGCTTTCGCTGCCGTTGAAGGTATTTTCTTTA 214943 Query 61529 GTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCT 61588 |||| || ||||| | || || |||||||||||| | || | ||||| ||| |||| | Sbjct 214944 GTGGTTCTTTTGCTTCTATTTTCTGGTTGAAGAAAAGAGGTTTAATGCCAGGTTTGACTT 215003 Query 61589 TCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || |||||| ||||| | | ||||| || ||||| || ||||| Sbjct 215004 TCTCCAATGAATTGATTTGCAGAGACGAAGGTTTGCATACAGACTTTGC 215052 >seq147 Length=818043 Score = 116 bits (128), Expect = 3e-21 Identities = 586/923 (63%), Gaps = 12/923 (1%) Strand=Plus/Plus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 |||| ||| || | ||| ||||| || | || ||||| | | || || |||||||| Sbjct 277315 GCAATAGAAGCCAAGTTACAGACGGCAACTTCTTCAGGGTCTGAGTATTCAACAATTTCA 277374 Query 66068 GTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGC 66125 |||| ||| | || | ||| | ||||| |||| |||||| |||| || | Sbjct 277375 CAACACAAGTTA--GAAGATTTGATGATACCCAAGTTCTTTTGATTGGTCTTCTTGTTAC 277432 Query 66126 ATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGT 66185 | || |||||||||| |||| | ||||| ||||| || ||| | || | || |||| Sbjct 277433 AAGCGTCCTTGTACAACATGAAAGGAGTACCGGTTTCGGTTTGAGCTTCCAAAATTGCGT 277492 Query 66186 GCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGT 66245 ||| | | || || | || || | ||| || | |||||| | |||| Sbjct 277493 ACCACAACTTCTGGGCTTTGATGGTTTGTCTACCTCTATTTTCACTTTCGTATTTCTCGT 277552 Query 66246 AGAG-GTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACAC 66304 | | || || ||| ||||| | || || | | || ||| | | |||| | Sbjct 277553 ACAAAGTCTT-GAATTCATCACCATAAACATCAGCTAAACCTGGGGCTTCATTTGGAGAG 277611 Query 66305 ATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGG 66364 | || | ||| ||||||| || ||| || | |||||| | ||| || ||||| | | Sbjct 277612 AACAAAGTCCAGTCACCATTCTTTTCAACTCTTTCCATAAACAAATCTGGAATCCACAAG 277671 Query 66365 GCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGG 66424 || ||| | ||| | |||| || || | |||||||| || | | ||||| | Sbjct 277672 GCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTTCCGTGATTCTTTCTGATGTCGATG 277731 Query 66425 AACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTG 66484 || || || || |||| |||||||| || | ||| | ||| || | || | ||| Sbjct 277732 AAGTCGAAAATATCGGAGTGCCATGGCTCTAAGTACAAGGCAAAAGCACCAGGTCTCTTG 277791 Query 66485 CCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGC 66544 ||||||||||||||||| | || |||||||| || | | ||| || | || Sbjct 277792 TTACCACCTTGGTCGACGTATCTGGCAGTGTTGTTGAATACCCTGACCATAGGAATGATA 277851 Query 66545 CCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC-CCGTATATCGTGAAC 66603 ||||| || | || || || || | ||| | || || | | |||| ||||| Sbjct 277852 CCGTTGGAAGTACCGTTAGTACCAGCAATGTAAGCACC-AGTACTTCTAATATTGTGAAT 277910 Query 66604 ATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATCGGCCA-CTGTCCGG 66661 | || |||||||||||| || |||| || || ||||| || | | |||| | Sbjct 277911 GTGCAAACCAATACCACCAGCACTCTTGGAAATCAAGGCACATGTCTTCAAGGTGTC--G 277968 Query 66662 AATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGT 66721 | || || || || |||||| |||| |||| || | | | || || | || || Sbjct 277969 TAAATACCATCGATAGAGTCATCCTTCATGGCCACCAAGAAACAAGACGACATCTGAGGA 278028 Query 66722 TTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATG 66781 | || || | || ||| | ||| || | |||| || ||||| |||||||| Sbjct 278029 CTTGGAGTACCAGCATTGAACAAGGTTGGAGACCCGTGAGTGAAGTATCTTTGAGACATG 278088 Query 66782 TAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGC 66841 | ||||| ||||| ||||| ||||||| || || || || || | ||| || | Sbjct 278089 TGGTTGTAGGTCTCAATGACCTTTTCAATGTCGTCACCGTGGATACCAACAGCAACTCTC 278148 Query 66842 ATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGT 66901 || | | || ||| || | ||| ||| | | | || || || || || | | Sbjct 278149 ATGATCAAGTGTTGTGGTCTCTCGGCCACTTTACCGTCTATTCTCAACAAATACGATCTT 278208 Query 66902 TCCAGGGTCTTGATACCAAAGTA 66924 |||| |||||||| |||||| || Sbjct 278209 TCCAAGGTCTTGAAACCAAAATA 278231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567074536240