Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 9e-19
>seq6
Length=1274382
Score = 100 bits (110), Expect = 9e-19
Identities = 330/519 (64%), Gaps = 97/519 (19%)
Strand=Plus/Plus
Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
||||| | |||||| || |||||||||||| |||||||| |||||| || ||||||||
Sbjct 607900 TCTTTAGTTCTACATGACATTTCTGTTCTCTTTGAGTCCCTCTTAGGTCATTTGCGTTAT 607959
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
|| |||| |||| |||||||||||||||| |||| | ||||| |||
Sbjct 607960 CTTTCAACACATGT---------TCCAAACTCCCCACCTGGCAATATTTACAACCTGGA- 608009
Query 126 CGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
|| || ||||||| ||| | | || |||| | ||| |
Sbjct 608010 -----------------AAATGCTAGAAAAT-GTC-----AAATCACTTCCAC-TCACTC 608045
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| ||||||| |||| |||| |||||| | ||| || || | || || ||||| |
Sbjct 608046 AAGAAGTAAAGAAACAATAATGGTAGTTGGATTGCATTTATTCTGATAC--ACCCCACGT 608103
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||| ||| || ||| ||||||| ||| |||| |||| ||||
Sbjct 608104 ---------CTCTTCAGTGAT--------GTCAAACTAGAGCCAACCTCATCAGGTTCTT 608146
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
||| |||||| |||| | |||| || | | || ||| ||| ||
Sbjct 608147 -TTTTCCCGCTAATTCTGTCAAGTCC----------------ATCCACTGGATGGTATAT 608189
Query 366 AGGGACAGTGGGAATCTCGTTAATCCAT-TCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||| ||| ||| | ||||||||||| | || | |||||| |||| || ||
Sbjct 608190 AGGGAGAGTTAGAAGCCCGTTAATCCATGACCTG-GTGTCACTGATTA-------AGACA 608241
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||| || || ||| | | ||| ||||| || || ||||| ||
Sbjct 608242 GTTGGCTAGCTCAAAAGA--CCTGGTTTCTCCCCCCACTT------------TTGAACTT 608287
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523
||||||||||| ||||| ||||| ||||| |||||
Sbjct 608288 CTTCACTTTGA----CAGAGGACTGGTTAGAAACCACAT 608322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199280512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |