Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 295 5e-75 seq24 277 1e-69 seq1 111 1e-19 >seq3 Length=1361780 Score = 295 bits (326), Expect = 5e-75 Identities = 592/871 (68%), Gaps = 10/871 (1%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||||||| |||| | || || |||| |||||||| ||||| || |||||||||||| Sbjct 14340 TTCCCCATCCAGTACCATGAGATCTGGCAGATGTACAAGAAGGCTGAGGCTTCCTTCTGG 14399 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGC 61182 || | |||||| ||||| | ||| |||||| ||||||||| || | | | Sbjct 14400 ACTGCTGAGGAGATCGATCTCGGCAAGGACATGGGCGACTGGGAGAACCGACTCAACAAC 14459 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 | || | | ||||| || || |||| |||||||| || || ||||| |||||| Sbjct 14460 GACGAGCGATTCTTCATCTCTCACGTTCTGGCCTTCTTTGCTGCCTCCGACGGAATCGTC 14519 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 || ||||| | |||| || ||| | ||||| || | | ||||| || ||| Sbjct 14520 AACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTCCAGGCTCCCGAGGCCAAGTGCTTC 14579 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| |||||||| |||||||||| | ||| | |||||||| Sbjct 14580 TACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACCTACTCGCTGCTCATCGAC 14639 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACC 61421 || ||||||| ||| | ||| || ||| | ||||||| ||||||||||| || || Sbjct 14640 ACATACATCAAGGACCCCAAGGAGCG-AAACTACCTGTTCAACGCCATCGAGACCATCCC 14698 Query 61422 GGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACAT 61480 | ||| ||| || || ||||| |||| ||||| || | | | | | || | Sbjct 14699 CTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGA-GTCCACCT 14757 Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTG 61540 |||| || || | | || ||||| | ||||||||| | |||||| || || || | Sbjct 14758 TTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCG 14817 Query 61541 CCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGT 61600 || | ||||| ||| | ||||| || || || |||||||| || |||||| ||| ||| Sbjct 14818 CCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGC 14877 Query 61601 TGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATC 61660 | || || || |||||||| |||| || ||||| | |||| ||| | | | Sbjct 14878 TCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTC---ACC 14934 Query 61661 TGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG 61720 | | ||| || || || || || ||| | || | || ||||| || |||| Sbjct 14935 TCGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCG 14994 Query 61721 AACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAA 61780 | ||||| || ||||| |||||| ||||| || |||||||||| || | Sbjct 14995 AGCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAAGCTCA 15054 Query 61781 TGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGA 61840 ||| ||||| ||||| ||||| |||||||| ||| |||| | | | || | | | Sbjct 15055 TGTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGGCAACACCAAGG 15114 Query 61841 TCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGA 61900 |||| || | | ||||| || || |||||||| | || || |||| || ||||| | Sbjct 15115 TCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCA 15174 Query 61901 ATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | || |||||||| || || |||||| || Sbjct 15175 ACTTCTTCGAGAAGCGAGTCTCCGACTACCA 15205 >seq24 Length=170883 Score = 277 bits (306), Expect = 1e-69 Identities = 985/1515 (65%), Gaps = 56/1515 (4%) Strand=Plus/Minus Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||||||||| | || || || || || |||||||| ||| ||| || ||| | Sbjct 96829 TGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCAC 96770 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || || ||| ||||| || | || || || || ||||||||||| |||| || ||| Sbjct 96769 TCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAG 96710 Query 65552 TTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAAT-TCGTCCCAGTTCCACATCGGT 65608 ||||||| ||| || |||| || ||| | | || |||||||| | ||| | | Sbjct 96709 TTTCGCATACCGGTC--TTCATGATATTG-GCCTTAAGATCGTCCCACTCCCAAAGC--- 96656 Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668 ||| | | |||| ||||| || || ||| ||| | ||| || || Sbjct 96655 ---TCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAG 96599 Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728 || |||| | ||||| | || ||||| || | | | || ||||| || Sbjct 96598 CCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCT 96539 Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTA 65787 | || ||||||||||| || | || || ||| | ||||| | ||| | Sbjct 96538 CCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCGGCAGACTCAAA 96480 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 || | | || | || |||||||||||||| ||||| || | | | || || || Sbjct 96479 GGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCG 96420 Query 65848 ATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 ||| |||| ||||| | ||| ||||| || || |||||||| || ||||||||| Sbjct 96419 ATGTCGCATGTTGGA-CTTCTTTGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGG 96361 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC----AAA 65961 || | || || | || | ||||| ||| ||| | | ||| || || Sbjct 96360 CGTTGAGGTTTCGCACAATGACTTTGGCGATATCGT-GCAGCTTCTTGAAGTCGTAGAAG 96302 Query 65962 ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAG 66021 ||| | || || ||||| ||||| |||| ||||||| || || || Sbjct 96301 GAGTTGGTGTCG-TCTCGAGTG---------ACAAAGGTGGGCAGGGCAATGGAGGCCAG 96252 Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081 |||||| ||||| | ||| || |||| | ||||||||||| ||| |||||| || Sbjct 96251 GTTGCAAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTT--G 96194 Query 66082 GCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 | || | ||||| || | |||| || || ||| || ||||| ||||||||||| Sbjct 96193 GAAGACTTGATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAG 96134 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 | |||| | || | |||| ||| ||| | || | ||| || ||| || | Sbjct 96133 AGCATGAAGGGGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTGG 96074 Query 66200 GCCTTCACCGTACGT--ACC---GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTT 66254 || | || ||| ||| ||||| |||| ||||| || ||||| || || | Sbjct 96073 GCGGGGATGGTTCGTCGACCTCGGCCCT-CCTT----CTCGTACTGCTCGTACAGCTGCT 96019 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314 ||| || || | || ||| ||||| ||||||| || || ||||| || | || Sbjct 96018 TGAACTCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCC 95959 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 | || | | ||| || || || ||| || ||||| || ||||| ||||| ||| | Sbjct 95958 ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACA 95899 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 | || || ||||| |||||| | ||||| || || |||| ||| |||||| |||| Sbjct 95898 GGTCTCGGGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGA 95839 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 ||||| | ||||| || || ||||| ||||| || | || || ||| ||| || | Sbjct 95838 TGTCGTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCT 95779 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 |||| ||||| || || |||||| ||||||||| ||| || |||| ||||| || Sbjct 95778 GGTCCACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGG 95719 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || ||||||||| | ||| ||| || || || || | ||| | ||||| | Sbjct 95718 TTCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGA 95659 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGT 66671 |||| || || | ||| || || |||||| || | | || | | ||||||| Sbjct 95658 TACCGCCAGCAGACTTGGAAATCAGAGCACA---GGTCTTGAGGGTATCGTAGATGCCGT 95602 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 | |||||||| |||| ||| | | ||| | || || | ||||| | ||| || Sbjct 95601 CGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTC 95542 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791 | || | |||||||||| | |||||| |||||||| | |||||||||| ||||| | Sbjct 95541 CAGCGTTGTAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGG 95482 Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCACATCGCATCAGGAGG 66850 |||||||| | |||||| || || || || |||| | ||| |||||| | | Sbjct 95481 TCTCGATGGCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACAC-TCGCATGATCATC 95423 Query 66851 TATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909 | || || || ||| || | | ||| |||| ||| | ||| | || |||||||| Sbjct 95422 TGCTGGGGTCGCTCG-GCAACAGCTCCGTTGACTCGCAACAGGTATGCTCGCTCCAGGGT 95364 Query 66910 CTTGATACCAAAGTA 66924 || | |||||||| Sbjct 95363 TTTAAAGCCAAAGTA 95349 >seq1 Length=2434256 Score = 111 bits (122), Expect = 1e-19 Identities = 232/344 (67%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || | ||| | ||||| |||||||| ||||||| | ||||| Sbjct 1213668 CATGAACAGATCGGGAACCCATAATGCGTAAAAGAGATCACGTGCTCTGTTTTCCTCGGC 1213727 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||| |||||||||| | | ||| || || || || ||||||||||| |||| ||| Sbjct 1213728 TCCGTGGTTTTTGCGCAGATTCAAGAAATCCAAAATATCCGCATGCCATGGCTCCAAGTA 1213787 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || || |||| || ||| ||| ||| |||||||| ||||| | || || || Sbjct 1213788 GACTGCAAACGCTCCAGGACGCTTGTTGCCGCCTTGGTCCACGTATCTGGCTGTGTTATT 1213847 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 ||| || || | ||| || || | || ||||| || | | ||| |||| || Sbjct 1213848 GAACACTCGGAGCATGGGAACAATGCCTGAGGATTTTCCCTGAGAGCCTGTGATGATGGT 1213907 Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGA--TG 66637 || || | || | ||| | || |||||| || || || || ||||| || | || Sbjct 1213908 GCCCTTAGCTCTGATGTTGTGGATATGCAGACCTATGCCTCCTGCGGTCTTTGAAATTTG 1213967 Query 66638 GCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 | |||| | | | |||| | | |||||||| |||||||| Sbjct 1213968 GGCGCACGTTTTGAGAGTGTC--GTAGATGCCGTCGATGGAGTC 1214009 Score = 95.1 bits (104), Expect = 1e-14 Identities = 323/494 (65%), Gaps = 12/494 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || |||| ||||| | || | |||||||||||||| || Sbjct 1212399 ATCAACGGTGAACTGAATGGCATGGGCAGCAGGTGGAGTACGTAGATAGTACATGCCTGT 1212458 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCA-TAATTCGGCT 65195 ||||| || || ||| | | ||||||||||| || | ||||||| | | | Sbjct 1212459 TTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTG-TGATTTTGCCGTGGGTGATAT 1212517 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 ||| || || || | ||||| ||| || ||||| || | ||| | || |||| Sbjct 1212518 CGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATGTAGGGAGCTCGAGCCGCCGCCA 1212577 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACA-GGC---GACGTACC 65311 | || || || || || |||||||| ||||| | || | ||| || || Sbjct 1212578 TATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTCCTATAGACGGCTCTGATGTGT- 1212636 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACG 65370 || || |||| || ||| | || ||| | |||| | | || || || Sbjct 1212637 TCG---GGGATCTGGGTGATACTCTGTATCGAGCCATTGTCGTGGA-TGATTCGGTTTTT 1212692 Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC 65430 |||| ||| | ||||| |||| | ||| |||| || | || | | ||||| || Sbjct 1212693 CATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCATCAGCCAATGGTTGATCAC 1212752 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 | |||||||| | | | || ||||| | || |||||||||||| || ||||| | Sbjct 1212753 CAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGACGTGTACGGCTCAAAACA 1212812 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||| ||| ||||| || | ||| || || || ||||| ||||| || | ||| || Sbjct 1212813 CTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCATAGGAGCCACTAGCAACGA 1212872 Query 65551 GTTTCGCAATCCGT 65564 |||||||| |||| Sbjct 1212873 GTTTCGCATACCGT 1212886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567786804160