Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3 295 5e-75
seq24 277 1e-69
seq1 111 1e-19
>seq3
Length=1361780
Score = 295 bits (326), Expect = 5e-75
Identities = 592/871 (68%), Gaps = 10/871 (1%)
Strand=Plus/Plus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||||||| |||| | || || |||| |||||||| ||||| || ||||||||||||
Sbjct 14340 TTCCCCATCCAGTACCATGAGATCTGGCAGATGTACAAGAAGGCTGAGGCTTCCTTCTGG 14399
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGC 61182
|| | |||||| ||||| | ||| |||||| ||||||||| || | | |
Sbjct 14400 ACTGCTGAGGAGATCGATCTCGGCAAGGACATGGGCGACTGGGAGAACCGACTCAACAAC 14459
Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242
| || | | ||||| || || |||| |||||||| || || ||||| ||||||
Sbjct 14460 GACGAGCGATTCTTCATCTCTCACGTTCTGGCCTTCTTTGCTGCCTCCGACGGAATCGTC 14519
Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302
|| ||||| | |||| || ||| | ||||| || | | ||||| || |||
Sbjct 14520 AACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTCCAGGCTCCCGAGGCCAAGTGCTTC 14579
Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362
|||||||||||||| |||||||| |||||||||| | ||| | ||||||||
Sbjct 14580 TACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACCTACTCGCTGCTCATCGAC 14639
Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TTGTTCAATGCCATCGAGACGATACC 61421
|| ||||||| ||| | ||| || ||| | ||||||| ||||||||||| || ||
Sbjct 14640 ACATACATCAAGGACCCCAAGGAGCG-AAACTACCTGTTCAACGCCATCGAGACCATCCC 14698
Query 61422 GGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACAT 61480
| ||| ||| || || ||||| |||| ||||| || | | | | | || |
Sbjct 14699 CTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGA-GTCCACCT 14757
Query 61481 TTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTG 61540
|||| || || | | || ||||| | ||||||||| | |||||| || || || |
Sbjct 14758 TTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCG 14817
Query 61541 CCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGT 61600
|| | ||||| ||| | ||||| || || || |||||||| || |||||| ||| |||
Sbjct 14818 CCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGC 14877
Query 61601 TGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATC 61660
| || || || |||||||| |||| || ||||| | |||| ||| | | |
Sbjct 14878 TCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTC---ACC 14934
Query 61661 TGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG 61720
| | ||| || || || || || ||| | || | || ||||| || ||||
Sbjct 14935 TCGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCG 14994
Query 61721 AACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAA 61780
| ||||| || ||||| |||||| ||||| || |||||||||| || |
Sbjct 14995 AGCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAAGCTCA 15054
Query 61781 TGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGA 61840
||| ||||| ||||| ||||| |||||||| ||| |||| | | | || | | |
Sbjct 15055 TGTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGGCAACACCAAGG 15114
Query 61841 TCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGA 61900
|||| || | | ||||| || || |||||||| | || || |||| || ||||| |
Sbjct 15115 TCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCA 15174
Query 61901 ATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
| || |||||||| || || |||||| ||
Sbjct 15175 ACTTCTTCGAGAAGCGAGTCTCCGACTACCA 15205
>seq24
Length=170883
Score = 277 bits (306), Expect = 1e-69
Identities = 985/1515 (65%), Gaps = 56/1515 (4%)
Strand=Plus/Minus
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||||||||| | || || || || || |||||||| ||| ||| || ||| |
Sbjct 96829 TGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCAC 96770
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551
|| || ||| ||||| || | || || || || ||||||||||| |||| || |||
Sbjct 96769 TCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAG 96710
Query 65552 TTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAAT-TCGTCCCAGTTCCACATCGGT 65608
||||||| ||| || |||| || ||| | | || |||||||| | ||| | |
Sbjct 96709 TTTCGCATACCGGTC--TTCATGATATTG-GCCTTAAGATCGTCCCACTCCCAAAGC--- 96656
Query 65609 TTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAA 65668
||| | | |||| ||||| || || ||| ||| | ||| || ||
Sbjct 96655 ---TCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAG 96599
Query 65669 CCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCG 65728
|| |||| | ||||| | || ||||| || | | | || ||||| ||
Sbjct 96598 CCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCT 96539
Query 65729 GCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTA 65787
| || ||||||||||| || | || || ||| | ||||| | ||| |
Sbjct 96538 CCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCGGCAGACTCAAA 96480
Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847
|| | | || | || |||||||||||||| ||||| || | | | || || ||
Sbjct 96479 GGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCG 96420
Query 65848 ATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906
||| |||| ||||| | ||| ||||| || || |||||||| || |||||||||
Sbjct 96419 ATGTCGCATGTTGGA-CTTCTTTGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGG 96361
Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC----AAA 65961
|| | || || | || | ||||| ||| ||| | | ||| || ||
Sbjct 96360 CGTTGAGGTTTCGCACAATGACTTTGGCGATATCGT-GCAGCTTCTTGAAGTCGTAGAAG 96302
Query 65962 ATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAG 66021
||| | || || ||||| ||||| |||| ||||||| || || ||
Sbjct 96301 GAGTTGGTGTCG-TCTCGAGTG---------ACAAAGGTGGGCAGGGCAATGGAGGCCAG 96252
Query 66022 GTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACT 66081
|||||| ||||| | ||| || |||| | ||||||||||| ||| |||||| ||
Sbjct 96251 GTTGCAAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTT--G 96194
Query 66082 GCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139
| || | ||||| || | |||| || || ||| || ||||| |||||||||||
Sbjct 96193 GAAGACTTGATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAG 96134
Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199
| |||| | || | |||| ||| ||| | || | ||| || ||| || |
Sbjct 96133 AGCATGAAGGGGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTGG 96074
Query 66200 GCCTTCACCGTACGT--ACC---GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTT 66254
|| | || ||| ||| ||||| |||| ||||| || ||||| || || |
Sbjct 96073 GCGGGGATGGTTCGTCGACCTCGGCCCT-CCTT----CTCGTACTGCTCGTACAGCTGCT 96019
Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314
||| || || | || ||| ||||| ||||||| || || ||||| || | ||
Sbjct 96018 TGAACTCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCC 95959
Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374
| || | | ||| || || || ||| || ||||| || ||||| ||||| ||| |
Sbjct 95958 ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACA 95899
Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434
| || || ||||| |||||| | ||||| || || |||| ||| |||||| ||||
Sbjct 95898 GGTCTCGGGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGA 95839
Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494
||||| | ||||| || || ||||| ||||| || | || || ||| ||| || |
Sbjct 95838 TGTCGTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCT 95779
Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554
|||| ||||| || || |||||| ||||||||| ||| || |||| ||||| ||
Sbjct 95778 GGTCCACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGG 95719
Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614
| || ||||||||| | ||| ||| || || || || | ||| | ||||| |
Sbjct 95718 TTCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGA 95659
Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGT 66671
|||| || || | ||| || || |||||| || | | || | | |||||||
Sbjct 95658 TACCGCCAGCAGACTTGGAAATCAGAGCACA---GGTCTTGAGGGTATCGTAGATGCCGT 95602
Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731
| |||||||| |||| ||| | | ||| | || || | ||||| | ||| ||
Sbjct 95601 CGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTC 95542
Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACG 66791
| || | |||||||||| | |||||| |||||||| | |||||||||| ||||| |
Sbjct 95541 CAGCGTTGTAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGG 95482
Query 66792 TCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCACATCGCATCAGGAGG 66850
|||||||| | |||||| || || || || |||| | ||| |||||| | |
Sbjct 95481 TCTCGATGGCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACAC-TCGCATGATCATC 95423
Query 66851 TATTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGT 66909
| || || || ||| || | | ||| |||| ||| | ||| | || ||||||||
Sbjct 95422 TGCTGGGGTCGCTCG-GCAACAGCTCCGTTGACTCGCAACAGGTATGCTCGCTCCAGGGT 95364
Query 66910 CTTGATACCAAAGTA 66924
|| | ||||||||
Sbjct 95363 TTTAAAGCCAAAGTA 95349
>seq1
Length=2434256
Score = 111 bits (122), Expect = 1e-19
Identities = 232/344 (67%), Gaps = 4/344 (1%)
Strand=Plus/Plus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || ||||| || | ||| | ||||| |||||||| ||||||| | |||||
Sbjct 1213668 CATGAACAGATCGGGAACCCATAATGCGTAAAAGAGATCACGTGCTCTGTTTTCCTCGGC 1213727
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
||||| |||||||||| | | ||| || || || || ||||||||||| |||| |||
Sbjct 1213728 TCCGTGGTTTTTGCGCAGATTCAAGAAATCCAAAATATCCGCATGCCATGGCTCCAAGTA 1213787
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|| || |||| || ||| ||| ||| |||||||| ||||| | || || ||
Sbjct 1213788 GACTGCAAACGCTCCAGGACGCTTGTTGCCGCCTTGGTCCACGTATCTGGCTGTGTTATT 1213847
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
||| || || | ||| || || | || ||||| || | | ||| |||| ||
Sbjct 1213848 GAACACTCGGAGCATGGGAACAATGCCTGAGGATTTTCCCTGAGAGCCTGTGATGATGGT 1213907
Query 66580 TCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGA--TG 66637
|| || | || | ||| | || |||||| || || || || ||||| || | ||
Sbjct 1213908 GCCCTTAGCTCTGATGTTGTGGATATGCAGACCTATGCCTCCTGCGGTCTTTGAAATTTG 1213967
Query 66638 GCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681
| |||| | | | |||| | | |||||||| ||||||||
Sbjct 1213968 GGCGCACGTTTTGAGAGTGTC--GTAGATGCCGTCGATGGAGTC 1214009
Score = 95.1 bits (104), Expect = 1e-14
Identities = 323/494 (65%), Gaps = 12/494 (2%)
Strand=Plus/Plus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || |||||||| || |||| ||||| | || | |||||||||||||| ||
Sbjct 1212399 ATCAACGGTGAACTGAATGGCATGGGCAGCAGGTGGAGTACGTAGATAGTACATGCCTGT 1212458
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCA-TAATTCGGCT 65195
||||| || || ||| | | ||||||||||| || | ||||||| | | |
Sbjct 1212459 TTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTG-TGATTTTGCCGTGGGTGATAT 1212517
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
||| || || || | ||||| ||| || ||||| || | ||| | || ||||
Sbjct 1212518 CGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATGTAGGGAGCTCGAGCCGCCGCCA 1212577
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACA-GGC---GACGTACC 65311
| || || || || || |||||||| ||||| | || | ||| || ||
Sbjct 1212578 TATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTCCTATAGACGGCTCTGATGTGT- 1212636
Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACG 65370
|| || |||| || ||| | || ||| | |||| | | || || ||
Sbjct 1212637 TCG---GGGATCTGGGTGATACTCTGTATCGAGCCATTGTCGTGGA-TGATTCGGTTTTT 1212692
Query 65371 CATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC 65430
|||| ||| | ||||| |||| | ||| |||| || | || | | ||||| ||
Sbjct 1212693 CATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCATCAGCCAATGGTTGATCAC 1212752
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
| |||||||| | | | || ||||| | || |||||||||||| || ||||| |
Sbjct 1212753 CAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGACGTGTACGGCTCAAAACA 1212812
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| ||| ||| ||||| || | ||| || || || ||||| ||||| || | ||| ||
Sbjct 1212813 CTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCATAGGAGCCACTAGCAACGA 1212872
Query 65551 GTTTCGCAATCCGT 65564
|||||||| ||||
Sbjct 1212873 GTTTCGCATACCGT 1212886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567786804160
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