Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 3e-17
seq4 100 1e-15
>seq1
Length=2434256
Score = 105 bits (116), Expect = 3e-17
Identities = 112/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489
|||||||| |||||||||| | | |||||||||||||| || || || | || |||||
Sbjct 1009342 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGGACAACTCCCTCAGCA 1009283
Query 364490 GTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGA 364549
| ||||||||||| ||| | || | | ||||||||| ||||| || | | |||
Sbjct 1009282 GAGAAGGGCATATCCTCGTGTCGATAAGTCACACCAATGGTACCCTTCTGTCCGTGACGA 1009223
Query 364550 GAAGCAAACTTGTCGCCAATGACTGGG 364576
|| ||||||||||| ||||| |||||
Sbjct 1009222 GAGGCAAACTTGTCTCCAAT--CTGGG 1009198
>seq4
Length=1325655
Score = 100 bits (110), Expect = 1e-15
Identities = 239/359 (67%), Gaps = 2/359 (1%)
Strand=Plus/Plus
Query 12688 CAGAGTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAA 12747
|||||||| ||| ||||| | | || ||| | || ||| || ||||| |||
Sbjct 401607 CAGAGTAGGCACCTGCTTGGCGGTTCCCAGACCCATGATCATGATCACGTCGTAGTAGAT 401666
Query 12748 AACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACC 12807
|| |||||||| | |||| || || ||||| | ||| |||||||||| || || ||
Sbjct 401667 GACGTTCATGCCCATGGACTCGGCCAGAACAGACAGCTGGGAACCAATGTGGCCGTAGCC 401726
Query 12808 TACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTC-TTGTTCCAAA 12866
|| || || || ||||| |||| | || | ||| | | || || | ||||||||
Sbjct 401727 CACAATGCCCAGAGTCTTGCCTCGGATCTCCCAGCA-CTTGGACGAGACCTTGTTCCAGG 401785
Query 12867 TGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTC 12926
| || ||| | || |||||| || || | ||| || || || | || | || |
Sbjct 401786 TTCCGGCGTGCATCTCGATGTTTCGGTCGCCTAGCTGTCGCGACAGCATGATGATTTCGC 401845
Query 12927 CTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGC 12986
|||| |||||| |||||| | | |||| ||||||| || || || || ||||| |
Sbjct 401846 AGATGACGAGCTCGGCCACGGACCGCGAGTTGGAAAAGGGCGAGTTGAACACGGCAATAC 401905
Query 12987 CTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTATG 13045
| |||| || || |||| ||||| | | || ||||||||||| || |||
Sbjct 401906 CGTTGTTGGCGGCGTACTCGAGATCGACCTGGTTGGTGCCGATGCAGAAGCAGCCGATG 401964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885337395292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |