Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 5e-14 seq4 89.7 2e-12 >seq2 Length=3147093 Score = 95.1 bits (104), Expect = 5e-14 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 |||||||| |||||||||| | | |||||||||||||| || ||||| || || || || Sbjct 2759825 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGATACCCTCGGCT 2759884 Query 364490 GTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 | || |||||||| ||| | | | | | | ||||||||| ||||| || | | || Sbjct 2759885 GAGAATGGCATATCCTCGTGTCTGTAAG-TCACACCAATGGTACCCTTCTGTCCGTGACG 2759943 Query 364549 AGAAGCAAACTTGTCGCCAATGACTGGG 364576 || ||||||||||| ||||| ||||| Sbjct 2759944 CGAGGCAAACTTGTCTCCAAT--CTGGG 2759969 >seq4 Length=2565013 Score = 89.7 bits (98), Expect = 2e-12 Identities = 237/360 (66%), Gaps = 4/360 (1%) Strand=Plus/Minus Query 12688 CAGAGTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAA 12747 |||||||| ||| ||||| | | || ||| | || ||| || ||||| ||| Sbjct 310989 CAGAGTAGGCACCTGCTTGGCGGTACCCAGACCCATGATCATGATGACGTCGTAGTAGAT 310930 Query 12748 AACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACC 12807 || |||||||| | |||| || || ||||| | ||| || ||||| | || || || Sbjct 310929 GACGTTCATGCCCATGGACTCGGCGAGAACAGACAGCTGGGAGCCAATATGGCCGTATCC 310870 Query 12808 TACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG--AGAAGTCTTGTTCCAA 12865 || || || |||||||| |||| | || | ||| |||| ||| ||||||||| Sbjct 310869 CACAATTCCCAGGGTCTTGCCTCGGATCTCCCAGCA--CTTGGAAGACACCTTGTTCCAG 310812 Query 12866 ATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGT 12925 | || ||| | || |||||| || || | |||||| || || | || | | Sbjct 310811 GTTCCGGCGTGCATCTCAATGTTTCGGTCGCCCAGCTGACGCGACAGCATGATGATCTCG 310752 Query 12926 CCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATG 12985 | |||| |||||| || || || | |||| | ||||| || || || || ||||| Sbjct 310751 CAGATGACGAGCTCGGCGACAGATCGGGAGTTGGAGAAGGGCGAGTTGAACACGGCAATA 310692 Query 12986 CCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTATG 13045 || |||| || || |||| ||||| | | || ||||||||||| || ||| Sbjct 310691 CCGTTGTTGGCGGCGTACTCCAGATCGACCTGGTTGGTGCCGATGCAGAAGCAGCCAATG 310632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885409845613