Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq12 260 2e-67
>seq12
Length=2092
Score = 260 bits (288), Expect = 2e-67
Identities = 198/229 (86%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1678 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1621
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | ||||| ||||||
Sbjct 1620 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 1561
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||| |||| | ||| |||||| || | | |||||||||||||||||||
Sbjct 1560 ACCTAGCCCTCTCGGGCTTGGTC---GACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1504
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 1503 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCGAACTTCC 1455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999788735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |