Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq24 174 7e-41
seq6 102 3e-19
>seq24
Length=2283
Score = 174 bits (192), Expect = 7e-41
Identities = 122/138 (88%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 546 TTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||
Sbjct 6 TTTGAGTAAACACAT--CCATTGGGACCCGAAAGATGGTGAACTATGCCTGGATAGGGTG 63
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||| |||||||||||||| |||||||||| |||||||||| ||||||||||||||||
Sbjct 64 AAGTCAGAGGAAACTCTGATGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTAGG 123
Query 666 ATTTGGGTATAGGGGCGA 683
|| |||||||||||||||
Sbjct 124 ATCTGGGTATAGGGGCGA 141
>seq6
Length=3777980
Score = 102 bits (112), Expect = 3e-19
Identities = 73/83 (88%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 546 TTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||||||| ||| | ||||||||||||||||||||||||||||||| ||||||||
Sbjct 3130614 TTTGAGTAAACACAT--CCATTGGGACCCGAAAGATGGTGAACTATGCCTGGATAGGGTG 3130557
Query 606 AAGCCAGAGGAAACTCTGGTGGA 628
||| |||||||||||||| ||||
Sbjct 3130556 AAGTCAGAGGAAACTCTGATGGA 3130534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999377950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |