Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12 329 5e-88 >seq12 Length=2092 Score = 329 bits (364), Expect = 5e-88 Identities = 227/257 (88%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1536 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1477 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||||||||| || | | |||||||||||||||||| ||| Sbjct 1476 CCTGTTATTGCCTCGAACTTCCATCTACTTGTAATAGATAGTCCCTCTAAGAAGCTAGCT 1417 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | | | ||||||||| |||| ||||||||||||||||||| |||||| Sbjct 1416 ACCTGCAATCGCAAGTAGAGCTATTTAGTAGGTCAAGGTCTCGTTCGTTATCGCAATTAA 1357 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1356 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 1297 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1296 AGAGCTATCAATCTGTC 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799776149