Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq12 513 4e-143 >seq12 Length=2092 Score = 513 bits (568), Expect = 4e-143 Identities = 419/505 (83%), Gaps = 43/505 (9%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | | || |||| |||||| | ||| ||| |||||||||||||| Sbjct 637 GTACTCATTCCAATTCCGAAACTCAAA-GAGCCCCGGATCGTTATATATTGTCACTACCT 579 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 578 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 519 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| Sbjct 518 TCTCAGGCTCCCTCTCCGGAATAGAACCCTGATTCCCCGTTACCCGTTGTTACCATGGTA 459 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||| ||||||||||||| |||||||||||||||||||||||||| || || Sbjct 458 GGCCACGATCCTACCATCGACAGTTGATAGGGCAGAAATTTGAATGATACACCG------ 405 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||| || || |||| ||| |||||||||||||| | ||||| Sbjct 404 -AAG---AT-CGGTTCGACAAGATATTATGAATCACC------------ATACTGTTGG- 363 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||| ||||||||| |||| | | |||| | | |||||||||| ||| Sbjct 362 TTTGTATCTAATATATACGC-----CAGAAGGC--------TGTCATGTATTAGTTCTGA 316 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 | ||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 315 AGTTATCACGGTTATCCATGTAGAAA---ACTATCAAATAAACGATAACTGATTTAATGA 259 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| Sbjct 258 GCCGTTCGCAGTTTCACTGTATA-ATTGTTTATACTTAGACATGCATGGCTTAGTCTTTG 200 Query 481 AGACAAGCATATG-ACTACTGGCAG 504 ||||||||||||| ||||||||||| Sbjct 199 AGACAAGCATATGAACTACTGGCAG 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399561984