Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq12 513 4e-143
>seq12
Length=2092
Score = 513 bits (568), Expect = 4e-143
Identities = 419/505 (83%), Gaps = 43/505 (9%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| | | || |||| |||||| | ||| ||| ||||||||||||||
Sbjct 637 GTACTCATTCCAATTCCGAAACTCAAA-GAGCCCCGGATCGTTATATATTGTCACTACCT 579
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 519
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||
Sbjct 518 TCTCAGGCTCCCTCTCCGGAATAGAACCCTGATTCCCCGTTACCCGTTGTTACCATGGTA 459
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||| ||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct 458 GGCCACGATCCTACCATCGACAGTTGATAGGGCAGAAATTTGAATGATACACCG------ 405
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||| || || |||| ||| |||||||||||||| | |||||
Sbjct 404 -AAG---AT-CGGTTCGACAAGATATTATGAATCACC------------ATACTGTTGG- 363
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||| ||||||||| |||| | | |||| | | |||||||||| |||
Sbjct 362 TTTGTATCTAATATATACGC-----CAGAAGGC--------TGTCATGTATTAGTTCTGA 316
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
| ||| ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 315 AGTTATCACGGTTATCCATGTAGAAA---ACTATCAAATAAACGATAACTGATTTAATGA 259
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||| ||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||
Sbjct 258 GCCGTTCGCAGTTTCACTGTATA-ATTGTTTATACTTAGACATGCATGGCTTAGTCTTTG 200
Query 481 AGACAAGCATATG-ACTACTGGCAG 504
||||||||||||| |||||||||||
Sbjct 199 AGACAAGCATATGAACTACTGGCAG 175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399561984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |