Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31] 29 sequences; 20,308,363 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 259 4e-64 seq6 226 2e-54 seq4 127 2e-24 >seq2 Length=3052417 Score = 259 bits (286), Expect = 4e-64 Identities = 601/898 (67%), Gaps = 16/898 (2%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| | ||| || || || | ||||||||| |||| | || || |||| |||||| Sbjct 507484 GAGAACCATCGACGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTAC 507425 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| || || || |||||||| | |||||| | ||| | || |||||| | Sbjct 507424 AAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGT 507365 Query 61162 GACTGGGAGCGTTTA-TCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218 ||||||||| | || | || ||| | ||||| || || | || ||| Sbjct 507364 GACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATCTCCCACGTTCTCGCATTC 507305 Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTG 61278 ||||| || || ||||||||||| || ||||| | | || || ||| | |||||| Sbjct 507304 TTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTG 507245 Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338 || | | ||||| || ||||||||||||||||| |||||||| ||||||| Sbjct 507244 CAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCC 507185 Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC-----GGGCGGAACGTGAAC 61393 |||| ||| | || ||||| || ||||||| ||| | | ||| ||| | || Sbjct 507184 GAGACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAAGAGCG-AACCT--AC 507128 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 ||||||| ||||||||||| || || | ||| || || || |||||| ||| Sbjct 507127 C--TGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCA 507070 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 | |||||| || | | | || ||||| || ||| | | || ||||| | |||| Sbjct 507069 AGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCG 507010 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| | || ||| || || || ||| | ||||| ||| | ||||| || || || | Sbjct 507009 AGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCA 506950 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || || |||||| ||| ||| | || || || |||||||| |||| ||| | Sbjct 506949 TGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACT 506890 Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTG 61693 |||| |||| ||| ||| | || | ||| || || || || || ||| | | Sbjct 506889 TTGCCTGCCTGCTTTTC--TCGC-ACCTTGAGAACCGACCCTCAAAGAAGATTGTTGAGG 506833 Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 | | || ||||| || ||||| ||||| || || ||||||||| ||||| Sbjct 506832 ACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTG 506773 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 || | || ||||| || |||| ||||| || || ||||| || ||||||| Sbjct 506772 GTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATCGAGTTTGTCGCTGACCGTC 506713 Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 || | || | | | |||| | | ||||| | | ||||| || || ||||||| Sbjct 506712 TGCTAGTTGCTCTCGGTAACTCCAAGGTGTATAACTCCACCAACCCCTTCGACTTCATGG 506653 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | | || || |||| |||||||| || ||||||||||| || || |||||| || Sbjct 506652 AGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAAGCGAGTGTCCGACTACCA 506595 >seq6 Length=3777980 Score = 226 bits (250), Expect = 2e-54 Identities = 618/941 (66%), Gaps = 18/941 (2%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| |||| || || | || || |||||||||||||| | ||| ||||||| | Sbjct 3775972 ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAG 3775913 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGAT 66110 ||||| ||||| || |||||| ||| | || | || || || | |||| || | Sbjct 3775912 TACTCTACAATCTCACAGCACAGGTTA--GAAGACTTAATTGTTCCGAGGTTCTTCTGGT 3775855 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | ||| || ||||| | |||||||||| |||| | || |||||| ||| ||| Sbjct 3775854 TGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGGGGTTGCCGGACTCGGTCTGGC 3775795 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTA-----CCGCCCTACC 66225 | || | ||| || ||| || | || | || ||| | ||||| || Sbjct 3775794 AGTCGAGAATGTGGTACCACAGCTTCTGGGCAGGGATGGTTCGTCGGCCTCGGCCCT-CC 3775736 Query 66226 TTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285 || ||||| || ||||| || || | || ||||| | || ||| |||| Sbjct 3775735 TTC----TCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACC 3775680 Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345 || |||| || || |||||||| | ||| ||| | | ||| || || || ||| || Sbjct 3775679 GGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAA 3775620 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 || || || ||||| || || ||| || || || ||||| ||| || | ||||| Sbjct 3775619 CAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTG 3775560 Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465 || || |||| ||| |||||| ||||| ||| | ||||| || || ||||| || || Sbjct 3775559 GTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGC 3775500 Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525 || | || || ||| ||| || || || ||||| || ||| ||||| |||| Sbjct 3775499 AAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGAC 3775440 Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585 ||||| ||| || |||| ||||| || | || || || || | ||| ||| || Sbjct 3775439 ACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGT 3775380 Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || || || | ||| | | |||||| ||||| ||||| | ||| || || |||||| Sbjct 3775379 AGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACA 3775320 Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705 | || | | |||||||| |||||||| |||| ||| | | ||| | || Sbjct 3775319 GGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACA 3775260 Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765 || | || || | ||| || |||| | |||| ||||| | |||||| || || Sbjct 3775259 CGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAA 3775200 Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825 ||| | ||||||| || ||||| ||||| ||| | ||||||| ||||| || || Sbjct 3775199 GTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGAT 3775140 Query 66826 CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC--CAGCCGATCCTTGATA 66883 |||| | |||||| | | | ||| || || ||| | |||| | | |||| Sbjct 3775139 ACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGC--ACCGTTGACT 3775082 Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||| | ||| | || ||||||||||||| |||||||| Sbjct 3775081 CGCAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 3775041 Score = 95.1 bits (104), Expect = 1e-14 Identities = 316/481 (66%), Gaps = 12/481 (2%) Strand=Plus/Minus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 ||||||||||| | |||||| ||| |||| | || |||||||| || |||||||| Sbjct 3776869 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 3776810 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCAC 65202 || ||| | ||||| ||||| || | | | |||| | | || || | Sbjct 3776809 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGG-TGAGCTTGCCCATGGTAGGGTCCTTGAT 3776751 Query 65203 ATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAAT 65262 || || || | |||||| ||| || ||| | | || || || ||||| ||||| Sbjct 3776750 GTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGTCAGCGGCCATCTCAAT 3776691 Query 65263 GATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGAA 65321 ||| || | || || |||||||| ||||||||||||||| | || |||| Sbjct 3776690 GATTCG-CTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATTTCCTGGGGAA 3776632 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCATCGACTC 65379 | | |||| ||| || || || | || |||| ||| || || ||| | ||| Sbjct 3776631 TGTTGGGGATGTTCTGCACGGATCC--GTTGTCAGCAACAATTCGGTTCTTCATGGTCTC 3776574 Query 65380 TGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAAC 65437 ||||| || | || | || | |||| | || | | |||| | ||||| Sbjct 3776573 GTTCCACAGGCCAACCTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACAATCTGGAAT 3776516 Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497 || || | || || || || || |||||||| ||| ||| || ||| | ||| || Sbjct 3776515 TCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTG 3776456 Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557 || ||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||| Sbjct 3776455 AAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGGAGCGACCAACAGCGAGTTTCGC 3776396 Query 65558 A 65558 | Sbjct 3776395 A 3776395 >seq4 Length=3654803 Score = 127 bits (140), Expect = 2e-24 Identities = 369/560 (66%), Gaps = 20/560 (4%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||||| |||||||| | ||| || || ||||| ||||| | ||||||||||| | Sbjct 397697 ACAAACTCAGGAAGGGCGACAGAGGCCAGATTGCAAACAGCAACCTCGTCAGGAGACGAG 397756 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 |||| |||||| ||||| |||| ||| | || ||||| | |||| || || Sbjct 397757 TACTGGACAATCTCGGTACACAAATTGGACGATTTGATTGTGCCGAGGTTCTTCTGGTTG 397816 Query 66113 CTCTT-GCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 || ||| || || || || |||| |||| | || || || |||| |||| Sbjct 397817 GATTTCGCG-TTACAGCTGTCTTTATACAGCATGAAAGGTCCTCCTGTTTCAATTTGGCT 397875 Query 66172 CTCAATGATGGCGTGCCAAAGAGCGCGTGC-CTTCACCGTACG-----TACCGCCCTACC 66225 | | ||||| | || ||| | || | ||| | || || | || | Sbjct 397876 CGTCAGAATGGCCTTG--AACAGCTCCTGGGCGTCAATCTGCGAGTTGTAAAGTCC---C 397930 Query 66226 TTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285 || | | |||||| ||||| | | ||||| || ||||| || |||| ||||| Sbjct 397931 TTAGACT-CGTAATCCTCGTACTTGCGGTCGAATTCCTCTCCCCAAACATCGGCCAGACC 397989 Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAAT---CACCATCCTGTTCTACACGACGCAT 66342 ||| ||| ||||| | || ||||| | | |||| || | || ||||| Sbjct 397990 TGGGGCCTTTCTGGGACAGAAAAGAGACCACTTTTCGCCATTCT---CGACTTTGCGCAT 398046 Query 66343 AAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC 66402 ||| || ||||| | ||| | |||||||||||| || || ||||| | ||||| || Sbjct 398047 AAACAGGTCAGGCACCCATAAGGCGTAGAAGAGGTCACGGGCTCGATTTTCCTCGGCACC 398106 Query 66403 GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGAT 66462 || |||||||||| | ||||| || || ||||| |||||||| || |||| || | Sbjct 398107 ATGGTTTTTGCGCAGATTCAGGAAATCCAAAATGTCTGCATGCCAGGGCTCCAAATACAC 398166 Query 66463 GGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAA 66522 || |||| || ||||||| || |||||||| ||||| ||||| |||||||| Sbjct 398167 TGCAAACGCTCCTGGACGTTTGTTTCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAA 398226 Query 66523 GACACGCAACATCGGTACGA 66542 || | | ||| || |||| Sbjct 398227 CACTCTGAGCATAGGAACGA 398246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567859484560