Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001307795.1_202016-05-31]
29 sequences; 20,308,363 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 259 4e-64
seq6 226 2e-54
seq4 127 2e-24
>seq2
Length=3052417
Score = 259 bits (286), Expect = 4e-64
Identities = 601/898 (67%), Gaps = 16/898 (2%)
Strand=Plus/Minus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
||||| | ||| || || || | ||||||||| |||| | || || |||| ||||||
Sbjct 507484 GAGAACCATCGACGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTAC 507425
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161
|| ||||| || || || |||||||| | |||||| | ||| | || |||||| |
Sbjct 507424 AAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGT 507365
Query 61162 GACTGGGAGCGTTTA-TCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218
||||||||| | || | || ||| | ||||| || || | || |||
Sbjct 507364 GACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATCTCCCACGTTCTCGCATTC 507305
Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTG 61278
||||| || || ||||||||||| || ||||| | | || || ||| | ||||||
Sbjct 507304 TTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTG 507245
Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338
|| | | ||||| || ||||||||||||||||| |||||||| |||||||
Sbjct 507244 CAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCC 507185
Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC-----GGGCGGAACGTGAAC 61393
|||| ||| | || ||||| || ||||||| ||| | | ||| ||| | ||
Sbjct 507184 GAGACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAAGAGCG-AACCT--AC 507128
Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453
||||||| ||||||||||| || || | ||| || || || |||||| |||
Sbjct 507127 C--TGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCA 507070
Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513
| |||||| || | | | || ||||| || ||| | | || ||||| | ||||
Sbjct 507069 AGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCG 507010
Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573
|||| | || ||| || || || ||| | ||||| ||| | ||||| || || || |
Sbjct 507009 AGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCA 506950
Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633
|||| || || |||||| ||| ||| | || || || |||||||| |||| ||| |
Sbjct 506949 TGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACT 506890
Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTG 61693
|||| |||| ||| ||| | || | ||| || || || || || ||| | |
Sbjct 506889 TTGCCTGCCTGCTTTTC--TCGC-ACCTTGAGAACCGACCCTCAAAGAAGATTGTTGAGG 506833
Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753
| | || ||||| || ||||| ||||| || || ||||||||| |||||
Sbjct 506832 ACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTG 506773
Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813
|| | || ||||| || |||| ||||| || || ||||| || |||||||
Sbjct 506772 GTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATCGAGTTTGTCGCTGACCGTC 506713
Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873
|| | || | | | |||| | | ||||| | | ||||| || || |||||||
Sbjct 506712 TGCTAGTTGCTCTCGGTAACTCCAAGGTGTATAACTCCACCAACCCCTTCGACTTCATGG 506653
Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
| | || || |||| |||||||| || ||||||||||| || || |||||| ||
Sbjct 506652 AGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAAGCGAGTGTCCGACTACCA 506595
>seq6
Length=3777980
Score = 226 bits (250), Expect = 2e-54
Identities = 618/941 (66%), Gaps = 18/941 (2%)
Strand=Plus/Minus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||| |||| || || | || || |||||||||||||| | ||| ||||||| |
Sbjct 3775972 ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAG 3775913
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGAT 66110
||||| ||||| || |||||| ||| | || | || || || | |||| || |
Sbjct 3775912 TACTCTACAATCTCACAGCACAGGTTA--GAAGACTTAATTGTTCCGAGGTTCTTCTGGT 3775855
Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170
| ||| || ||||| | |||||||||| |||| | || |||||| ||| |||
Sbjct 3775854 TGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGGGGTTGCCGGACTCGGTCTGGC 3775795
Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTA-----CCGCCCTACC 66225
| || | ||| || ||| || | || | || ||| | ||||| ||
Sbjct 3775794 AGTCGAGAATGTGGTACCACAGCTTCTGGGCAGGGATGGTTCGTCGGCCTCGGCCCT-CC 3775736
Query 66226 TTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285
|| ||||| || ||||| || || | || ||||| | || ||| ||||
Sbjct 3775735 TTC----TCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACC 3775680
Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345
|| |||| || || |||||||| | ||| ||| | | ||| || || || ||| ||
Sbjct 3775679 GGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAA 3775620
Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405
|| || || ||||| || || ||| || || || ||||| ||| || | |||||
Sbjct 3775619 CAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTG 3775560
Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465
|| || |||| ||| |||||| ||||| ||| | ||||| || || ||||| || ||
Sbjct 3775559 GTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGC 3775500
Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525
|| | || || ||| ||| || || || ||||| || ||| ||||| ||||
Sbjct 3775499 AAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGAC 3775440
Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585
||||| ||| || |||| ||||| || | || || || || | ||| ||| ||
Sbjct 3775439 ACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGT 3775380
Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645
|| || || | ||| | | |||||| ||||| ||||| | ||| || || ||||||
Sbjct 3775379 AGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACA 3775320
Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705
| || | | |||||||| |||||||| |||| ||| | | ||| | ||
Sbjct 3775319 GGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACA 3775260
Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765
|| | || || | ||| || |||| | |||| ||||| | |||||| || ||
Sbjct 3775259 CGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAA 3775200
Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825
||| | ||||||| || ||||| ||||| ||| | ||||||| ||||| || ||
Sbjct 3775199 GTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGAT 3775140
Query 66826 CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC--CAGCCGATCCTTGATA 66883
|||| | |||||| | | | ||| || || ||| | |||| | | ||||
Sbjct 3775139 ACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGC--ACCGTTGACT 3775082
Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
||| | ||| | || ||||||||||||| ||||||||
Sbjct 3775081 CGCAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 3775041
Score = 95.1 bits (104), Expect = 1e-14
Identities = 316/481 (66%), Gaps = 12/481 (2%)
Strand=Plus/Minus
Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143
||||||||||| | |||||| ||| |||| | || |||||||| || ||||||||
Sbjct 3776869 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 3776810
Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCAC 65202
|| ||| | ||||| ||||| || | | | |||| | | || || |
Sbjct 3776809 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGG-TGAGCTTGCCCATGGTAGGGTCCTTGAT 3776751
Query 65203 ATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAAT 65262
|| || || | |||||| ||| || ||| | | || || || ||||| |||||
Sbjct 3776750 GTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGTCAGCGGCCATCTCAAT 3776691
Query 65263 GATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGAA 65321
||| || | || || |||||||| ||||||||||||||| | || ||||
Sbjct 3776690 GATTCG-CTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATTTCCTGGGGAA 3776632
Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCATCGACTC 65379
| | |||| ||| || || || | || |||| ||| || || ||| | |||
Sbjct 3776631 TGTTGGGGATGTTCTGCACGGATCC--GTTGTCAGCAACAATTCGGTTCTTCATGGTCTC 3776574
Query 65380 TGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAAC 65437
||||| || | || | || | |||| | || | | |||| | |||||
Sbjct 3776573 GTTCCACAGGCCAACCTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACAATCTGGAAT 3776516
Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497
|| || | || || || || || |||||||| ||| ||| || ||| | ||| ||
Sbjct 3776515 TCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTG 3776456
Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557
|| ||||| |||| ||| || ||||| ||||||||||||||||||| |||||||||
Sbjct 3776455 AAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGGAGCGACCAACAGCGAGTTTCGC 3776396
Query 65558 A 65558
|
Sbjct 3776395 A 3776395
>seq4
Length=3654803
Score = 127 bits (140), Expect = 2e-24
Identities = 369/560 (66%), Gaps = 20/560 (4%)
Strand=Plus/Plus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||||| |||||||| | ||| || || ||||| ||||| | ||||||||||| |
Sbjct 397697 ACAAACTCAGGAAGGGCGACAGAGGCCAGATTGCAAACAGCAACCTCGTCAGGAGACGAG 397756
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112
|||| |||||| ||||| |||| ||| | || ||||| | |||| || ||
Sbjct 397757 TACTGGACAATCTCGGTACACAAATTGGACGATTTGATTGTGCCGAGGTTCTTCTGGTTG 397816
Query 66113 CTCTT-GCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171
|| ||| || || || || |||| |||| | || || || |||| ||||
Sbjct 397817 GATTTCGCG-TTACAGCTGTCTTTATACAGCATGAAAGGTCCTCCTGTTTCAATTTGGCT 397875
Query 66172 CTCAATGATGGCGTGCCAAAGAGCGCGTGC-CTTCACCGTACG-----TACCGCCCTACC 66225
| | ||||| | || ||| | || | ||| | || || | || |
Sbjct 397876 CGTCAGAATGGCCTTG--AACAGCTCCTGGGCGTCAATCTGCGAGTTGTAAAGTCC---C 397930
Query 66226 TTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285
|| | | |||||| ||||| | | ||||| || ||||| || |||| |||||
Sbjct 397931 TTAGACT-CGTAATCCTCGTACTTGCGGTCGAATTCCTCTCCCCAAACATCGGCCAGACC 397989
Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAAT---CACCATCCTGTTCTACACGACGCAT 66342
||| ||| ||||| | || ||||| | | |||| || | || |||||
Sbjct 397990 TGGGGCCTTTCTGGGACAGAAAAGAGACCACTTTTCGCCATTCT---CGACTTTGCGCAT 398046
Query 66343 AAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC 66402
||| || ||||| | ||| | |||||||||||| || || ||||| | ||||| ||
Sbjct 398047 AAACAGGTCAGGCACCCATAAGGCGTAGAAGAGGTCACGGGCTCGATTTTCCTCGGCACC 398106
Query 66403 GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGAT 66462
|| |||||||||| | ||||| || || ||||| |||||||| || |||| || |
Sbjct 398107 ATGGTTTTTGCGCAGATTCAGGAAATCCAAAATGTCTGCATGCCAGGGCTCCAAATACAC 398166
Query 66463 GGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAA 66522
|| |||| || ||||||| || |||||||| ||||| ||||| ||||||||
Sbjct 398167 TGCAAACGCTCCTGGACGTTTGTTTCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAA 398226
Query 66523 GACACGCAACATCGGTACGA 66542
|| | | ||| || ||||
Sbjct 398227 CACTCTGAGCATAGGAACGA 398246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567859484560
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