Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 170 8e-40 >seq6 Length=4002965 Score = 170 bits (188), Expect = 8e-40 Identities = 170/221 (77%), Gaps = 17/221 (8%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| ||||||||||||||||||||| |||| ||||||| ||||| |||||| Sbjct 3288847 CCCGTCTTGAAACACGGACCAAGGAGTCTAATGGATATGTGAGTGTTAGGGTGGCAAACC 3288788 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | ||||| |||||||||||| ||| | | || ||||||||| | Sbjct 3288787 CCAGCGCGCAATGAAAGTGAATGGATTCG--------------TTCAGAATCGACCGAAC 3288742 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 |||| | || || | ||||||||| ||| | |||||||||||||||||||||| Sbjct 3288741 TTGAT-TATTATGACAGTTTTGAGTAAACACAT--CCATTGGGACCCGAAAGATGGTGAA 3288685 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||| ||||||||||| |||||||||||||| |||| Sbjct 3288684 CTATGCCTGGATAGGGTGAAGTCAGAGGAAACTCTGATGGA 3288644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999849850