Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12]
7 sequences; 20,547,992 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 401 2e-109
seq1 78.8 3e-12
>seq6
Length=4002965
Score = 401 bits (444), Expect = 2e-109
Identities = 229/232 (99%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2113537 CTTCTTTCCC-GCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 2113479
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2113478 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 2113419
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2113418 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 2113359
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2113358 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACTTTGCGTCAACAT 2113307
Score = 111 bits (122), Expect = 5e-22
Identities = 92/108 (85%), Gaps = 6/108 (6%)
Strand=Plus/Minus
Query 225 GCGCCGAAACGGCTCCCACTT-ATTCT-ACACCTCTCAA-GTCATTTCACAAAGTCGGAC 281
|||||||| |||||||||| ||||| ||||| | | | ||| | ||||| ||| ||
Sbjct 3664907 GCGCCGAA---GCTCCCACTTTATTCTTACACCCCCCTATGTCTCTACACAATGTCAAAC 3664851
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3664850 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGC 3664803
>seq1
Length=2257857
Score = 78.8 bits (86), Expect = 3e-12
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT-CCCTTGGC 342
||||||||||||| |||||||||||| ||||| |||| | |||||| ||| ||||||
Sbjct 1286935 GAGTCAAGCTCAAAAGGGTCTTCTTT-CCCGCAGATTATGACAAGCCTGTTGACCTTGGA 1286877
Query 343 TGTGGTTTCGCTAGA 357
| |||||||||||||
Sbjct 1286876 TATGGTTTCGCTAGA 1286862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199885536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |