Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F001761485.1_202016-10-12] 7 sequences; 20,547,992 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2 122 1e-25 seq5 114 2e-23 seq6 109 9e-22 >seq2 Length=3044971 Score = 122 bits (134), Expect = 1e-25 Identities = 83/92 (90%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91 |||| ||||| ||||||||| |||||| ||| |||||||||||||| |||||||||| || Sbjct 3044819 TGGTGTTTGCTGCTGTCTGATCAGGCAATGCAGCGAAGCTACCATCCGCTGGATTAT-GC 3044877 Query 92 TGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||||||| |||||| |||| Sbjct 3044878 TGAACGCCTCTAAGTCAGAACCCATGCTAGAA 3044909 >seq5 Length=4198534 Score = 114 bits (126), Expect = 2e-23 Identities = 82/92 (89%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91 |||| ||||| ||||||||| |||||| ||| |||||||||||||| ||||||||||||| Sbjct 4198405 TGGTGTTTGCTGCTGTCTGATCAGGCAATGCAGCGAAGCTACCATCCGCTGGATTATGGC 4198464 Query 92 TGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||| |||| |||||||| |||||| |||| Sbjct 4198465 TGAACG-CTCTCAGTCAGAA-CCATGCTAGAA 4198494 >seq6 Length=4002965 Score = 109 bits (120), Expect = 9e-22 Identities = 80/92 (87%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91 |||| ||||| |||||||||||||||| ||| ||||||| |||| | ||||| ||||||| Sbjct 3999390 TGGTGTTTGCTGCTGTCTGACCAGGCAATGCAGCGAAGC-ACCACCCGCTGGGTTATGGC 3999448 Query 92 TGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||| ||||||||| |||||| |||| Sbjct 3999449 CGAACGCCTCCAAGTCAGAACCCATGCTAGAA 3999480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199944448