Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22] 29 sequences; 20,590,669 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq23 102 2e-19 >seq23 Length=2267247 Score = 102 bits (112), Expect = 2e-19 Identities = 176/255 (69%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109 || || ||||| |||| | |||| ||||||| || || |||||||||| || | || Sbjct 2000069 TCTCCATGGTTACCCTGGTTGTTGGTCAGGCCAAAGAGACGCTCCTTGAGGAAGTCGTCC 2000010 Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCC 169 ||||||||| | ||| | | ||| || | | || ||||| | || ||| Sbjct 2000009 TTCTCGTTCCAGAAGGCAAAGGACAGACAGAAGAGCTGATGGTTGTCGGACACACCGGCC 1999950 Query 170 AGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCC 229 || |||||||| ||||| ||||||| || || || | || |||||||||||||| | Sbjct 1999949 AGACCGTCCTCACCCCATCGGTAGGTTCGAGATCGAGCCTCGTTATGGGGGAAGTAGGAC 1999890 Query 230 CAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG- 288 ||||| || || | ||| ||| || || || || ||| |||| || |||||||| Sbjct 1999889 CAGGCATCTCCGTTGGCAGAGTAATCCTCTCGGACAGTGGCCCACTG----TCGCTCAGA 1999834 Query 289 ---GTAGGGGCCCCA 300 ||||| ||||| Sbjct 1999833 AACGTAGGTTCCCCA 1999819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999707680