Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20lipolytica_20[genbank_20GCA_5F900087985.1_202016-06-22]
29 sequences; 20,590,669 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq23 259 4e-64
seq29 226 2e-54
seq13 123 2e-23
>seq23
Length=2267247
Score = 259 bits (286), Expect = 4e-64
Identities = 601/898 (67%), Gaps = 16/898 (2%)
Strand=Plus/Plus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
||||| | ||| || || || | ||||||||| |||| | || || |||| ||||||
Sbjct 1856923 GAGAACCATCGACGGTTTGTGCTCTTCCCCATCCAGTACCACGAAATCTGGCAGATGTAC 1856982
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161
|| ||||| || || || |||||||| | |||||| | ||| | || |||||| |
Sbjct 1856983 AAGAAGGCCGAGGCCTCTTTCTGGACAGCTGAGGAGATTGATCTTGGAAAGGACATGGGT 1857042
Query 61162 GACTGGGAGCGTTTA-TCGAG--CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218
||||||||| | || | || ||| | ||||| || || | || |||
Sbjct 1857043 GACTGGGAGAACAGACTCAACAACGATGAGCGGTTCTTCATCTCCCACGTTCTCGCATTC 1857102
Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTG 61278
||||| || || ||||||||||| || ||||| | | || || ||| | ||||||
Sbjct 1857103 TTTGCTGCCTCCGACGGTATCGTTAACGAGAACCTGGTTGAGCGATTCTCCGGCGAGGTG 1857162
Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338
|| | | ||||| || ||||||||||||||||| |||||||| |||||||
Sbjct 1857163 CAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCC 1857222
Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC-----GGGCGGAACGTGAAC 61393
|||| ||| | || ||||| || ||||||| ||| | | ||| ||| | ||
Sbjct 1857223 GAGACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAAGAGCG-AACCT--AC 1857279
Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453
||||||| ||||||||||| || || | ||| || || || |||||| |||
Sbjct 1857280 C--TGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAAAAGGCCGACTGGGCCCTCA 1857337
Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513
| |||||| || | | | || ||||| || ||| | | || ||||| | ||||
Sbjct 1857338 AGTGGATCTCCGACGAAGAGTCCACCTTTGGAGAGCGACTCATTGCCTTTGCCGCCGTCG 1857397
Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573
|||| | || ||| || || || ||| | ||||| ||| | ||||| || || || |
Sbjct 1857398 AGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCA 1857457
Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633
|||| || || |||||| ||| ||| | || || || |||||||| |||| ||| |
Sbjct 1857458 TGCCTGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACTGACT 1857517
Query 61634 TTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTG 61693
|||| |||| ||| ||| | || | ||| || || || || || ||| | |
Sbjct 1857518 TTGCCTGCCTGCTTTTC--TCGC-ACCTTGAGAACCGACCCTCAAAGAAGATTGTTGAGG 1857574
Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753
| | || ||||| || ||||| ||||| || || ||||||||| |||||
Sbjct 1857575 ACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTTCCTTACTGACGCTCTGCCCTGTG 1857634
Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813
|| | || ||||| || |||| ||||| || || ||||| || |||||||
Sbjct 1857635 GTCTGCTTGGTATGAACGCCAAGCTGATGTGCCAGTACATCGAGTTTGTCGCTGACCGTC 1857694
Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873
|| | || | | | |||| | | ||||| | | ||||| || || |||||||
Sbjct 1857695 TGCTAGTTGCTCTCGGTAACTCCAAGGTGTATAACTCCACCAACCCCTTCGACTTCATGG 1857754
Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931
| | || || |||| |||||||| || ||||||||||| || || |||||| ||
Sbjct 1857755 AGAACATCTCTCTGGCCGGCAAGACCAACTTTTTCGAGAAGCGAGTGTCCGACTACCA 1857812
>seq29
Length=2752704
Score = 226 bits (250), Expect = 2e-54
Identities = 618/941 (66%), Gaps = 18/941 (2%)
Strand=Plus/Plus
Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052
||||| |||| || || | || || |||||||||||||| | ||| ||||||| |
Sbjct 57738 ACAAAAGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAG 57797
Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGAT 66110
||||| ||||| || |||||| ||| | || | || || || | |||| || |
Sbjct 57798 TACTCTACAATCTCACAGCACAGGTTA--GAAGACTTAATTGTTCCGAGGTTCTTCTGGT 57855
Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170
| ||| || ||||| | |||||||||| |||| | || |||||| ||| |||
Sbjct 57856 TGGACTTTCGGTTGCAGGAGTCCTTGTACAGCATGAAGGGGTTGCCGGACTCGGTCTGGC 57915
Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTA-----CCGCCCTACC 66225
| || | ||| || ||| || | || | || ||| | ||||| ||
Sbjct 57916 AGTCGAGAATGTGGTACCACAGCTTCTGGGCAGGGATGGTTCGTCGGCCTCGGCCCT-CC 57974
Query 66226 TTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACA 66285
|| ||||| || ||||| || || | || ||||| | || ||| ||||
Sbjct 57975 TTC----TCGTACTGCTCGTACAGCTGCTTAAACTCATCACCATAGACGTCGTCAAGACC 58030
Query 66286 TGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAA 66345
|| |||| || || |||||||| | ||| ||| | | ||| || || || ||| ||
Sbjct 58031 GGGGCACTCGTTGGGGCACATCAGGGTCCATTCAGCGTTCTGCTCGACTCGCTCCATGAA 58090
Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405
|| || || ||||| || || ||| || || || ||||| ||| || | |||||
Sbjct 58091 CAGGTCGGGGATCCACAGAGCCAGGAACAGGTCTCGGGCTCGAATCTCTTCCTTTCCGTG 58150
Query 66406 ATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGC 66465
|| || |||| ||| |||||| ||||| ||| | ||||| || || ||||| || ||
Sbjct 58151 GTTCTTTCGCAGCTCGCAGAACTCGAAGATATCGTCGTGCCAGGGCTCAAGGTACATTGC 58210
Query 66466 GAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGAC 66525
|| | || || ||| ||| || || || ||||| || ||| ||||| ||||
Sbjct 58211 AAAGGCACCAGGTCGCTTGTTGCCTCCCTGATCAACGTATCGGGCGGTGTTGTTATAGAC 58270
Query 66526 ACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG 66585
||||| ||| || |||| ||||| || | || || || || | ||| ||| ||
Sbjct 58271 ACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTAGTTCCAGCAATGTAGGAGCCAGT 58330
Query 66586 TGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645
|| || || | ||| | | |||||| ||||| ||||| | ||| || || ||||||
Sbjct 58331 AGCTCGGATGTTGTGGATAGACAGACCGATACCGCCGGCAGACTTGGAAATCAGAGCACA 58390
Query 66646 ATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705
| || | | |||||||| |||||||| |||| ||| | | ||| | ||
Sbjct 58391 GGTTTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACA 58450
Query 66706 TGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAA 66765
|| | || || | ||| || |||| | |||| ||||| | |||||| || ||
Sbjct 58451 CGACGACATCTGAGGCTGGGGAGTTCCGGCGTTGTAGAGAGTGGGGGAAGCGTGAGTGAA 58510
Query 66766 GTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAAT 66825
||| | ||||||| || ||||| ||||| ||| | ||||||| ||||| || ||
Sbjct 58511 GTACTTCTGAGACATATAGTTGTAGGTCTCAATGGCCCGGGCAATGTTGTCGCCGTGGAT 58570
Query 66826 CCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC--CAGCCGATCCTTGATA 66883
|||| | |||||| | | | ||| || || ||| | |||| | | ||||
Sbjct 58571 ACCGACAGAGACTCGCATGATCATCTGTTGGGGTCGCTCGGCAACAGC--ACCGTTGACT 58628
Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
||| | ||| | || ||||||||||||| ||||||||
Sbjct 58629 CGCAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAGTA 58669
Score = 95.1 bits (104), Expect = 1e-14
Identities = 316/481 (66%), Gaps = 12/481 (2%)
Strand=Plus/Plus
Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143
||||||||||| | |||||| ||| |||| | || |||||||| || ||||||||
Sbjct 56841 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATACCTGTCTTGAGA 56900
Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTCGGCCAC 65202
|| ||| | ||||| ||||| || | | | |||| | | || || |
Sbjct 56901 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGG-TGAGCTTGCCCATGGTAGGGTCCTTGAT 56959
Query 65203 ATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAAT 65262
|| || || | |||||| ||| || ||| | | || || || ||||| |||||
Sbjct 56960 GTGAATGTTGAGGGACTGAGACTGGTCAATGAAGGGGGATCGGTCAGCGGCCATCTCAAT 57019
Query 65263 GATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGAA 65321
||| || | || || |||||||| ||||||||||||||| | || ||||
Sbjct 57020 GATTCG-CTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATTTCCTGGGGAA 57078
Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAATGCGATTACGCATCGACTC 65379
| | |||| ||| || || || | || |||| ||| || || ||| | |||
Sbjct 57079 TGTTGGGGATGTTCTGCACGGATCC--GTTGTCAGCAACAATTCGGTTCTTCATGGTCTC 57136
Query 65380 TGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAAC 65437
||||| || | || | || | |||| | || | | |||| | |||||
Sbjct 57137 GTTCCACAGGCCAACCTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACAATCTGGAAT 57194
Query 65438 TCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTG 65497
|| || | || || || || || |||||||| ||| ||| || ||| | ||| ||
Sbjct 57195 TCACCAGCAAGAACTCGTCGAGAGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTG 57254
Query 65498 TTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGC 65557
|| ||||| |||| ||| || ||||| ||||||||||||||||||| |||||||||
Sbjct 57255 AAACCAAGAATCTGGGAAGTGGAGGCAGTGGGCATGGGAGCGACCAACAGCGAGTTTCGC 57314
Query 65558 A 65558
|
Sbjct 57315 A 57315
>seq13
Length=841849
Score = 123 bits (136), Expect = 2e-23
Identities = 216/313 (69%), Gaps = 6/313 (2%)
Strand=Plus/Minus
Query 66233 TCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACAC 66292
||||||| ||||| | | ||||| || ||||| || |||| ||||| ||| |
Sbjct 422212 TCGTAATCCTCGTACTTGCGGTCGAATTCCTCTCCCCAAACATCGGCCAGACCTGGGGCC 422153
Query 66293 TTGTGTGGACACATCAGCGACCAAT---CACCATCCTGTTCTACACGACGCATAAATAGA 66349
|| ||||| | || ||||| | | |||| || | || |||||||| ||
Sbjct 422152 TTTCTGGGACAGAAAAGAGACCACTTTTCGCCATTCT---CGACTTTGCGCATAAACAGG 422096
Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409
||||| | ||| | |||||||||||| || || ||||| | ||||| || || |||
Sbjct 422095 TCAGGCACCCATAAGGCGTAGAAGAGGTCACGGGCTCGATTTTCCTCGGCACCATGGTTT 422036
Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469
||||||| | ||||| || || ||||| |||||||| || |||| || | || |||
Sbjct 422035 TTGCGCAGATTCAGGAAATCCAAAATGTCTGCATGCCAGGGCTCCAAATACACTGCAAAC 421976
Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529
| || ||||||| || |||||||| ||||| ||||| |||||||| || |
Sbjct 421975 GCTCCTGGACGTTTGTTTCCTCCTTGGTCCACGTACCGAGCAGTGTTGTTGAACACTCTG 421916
Query 66530 AACATCGGTACGA 66542
| ||| || ||||
Sbjct 421915 AGCATAGGAACGA 421903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567859484560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |