Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1 219 1e-54
seq4 176 1e-41
>seq1
Length=4845111
Score = 219 bits (242), Expect = 1e-54
Identities = 146/160 (91%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404
|||||||||| ||| | ||| |||||||||||||||| ||| | |||||||||||||
Sbjct 35 CATGTATTAGTTCTGAAGTTATCACGGTTATCCATGTAATAAAAT--TATCAAATAAACG 92
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||
Sbjct 93 ATAACTGATTTAATGAGCCGTTCGCAGTTTCACTGTATA-ATTGTTTATACTTAGACATG 151
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| ||||||||||||||||||||||||||||||
Sbjct 152 CATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 191
>seq4
Length=2864709
Score = 176 bits (194), Expect = 1e-41
Identities = 135/160 (84%), Gaps = 13/160 (8%)
Strand=Plus/Plus
Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404
|||||||||| ||| | ||| |||||||||||||||| ||| | |||||||||||||
Sbjct 2268756 CATGTATTAGTTCTGAAGTTATCACGGTTATCCATGTAATAAAAT--TATCAAATAAACG 2268813
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||||||||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||
Sbjct 2268814 ATAACTGATTTAATGAGCCGTTCGCAGTTWCACTGTATA-ATTGTTTATACTTAGACATG 2268872
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||| |||
Sbjct 2268873 ----------TCTTTGAGACAAGCATATGACTACTGACAG 2268902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399713024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |