Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 273 2e-68 seq6 262 3e-65 >seq2 Length=4150472 Score = 273 bits (302), Expect = 2e-68 Identities = 1198/1862 (64%), Gaps = 54/1862 (3%) Strand=Plus/Minus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 ||||||||||| | ||| || ||| |||| | || |||||||| ||||||||||| Sbjct 326334 GTGAACTGGATGGGGGCAGCGGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGA 326275 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACA 65203 || ||| | ||||| ||||| || | | || | | ||||| | Sbjct 326274 CCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTACCCATGGTGGGCTCCTTGATG 326215 Query 65204 TGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATG 65263 || || || | ||||| ||| || ||| | || || || || ||||| || ||| Sbjct 326214 TGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGAGATCGGTCGGCGGCCATCTCGATG 326155 Query 65264 ATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAATTGGAA 65321 || || | || | | |||||||| |||||||||||||| | | | | ||| || | Sbjct 326154 ATTCG-CTTCTGGGAAATCTCCCACACGGTCTTGTACAG-CTCCTTGATCTCCTGGGGGA 326097 Query 65322 TCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATCGACTCT 65380 | | |||| ||| || || || | || || | ||| || || ||| | ||| Sbjct 326096 TGTTGGGGATGTTCTGCACGGATCCGTTGTCG-GCGACAATTCGGTTCTTCATAGTCTCG 326038 Query 65381 GACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTTGGAACT 65438 ||| | ||| | || | ||| | |||| ||| | | |||| | ||||||| Sbjct 326037 TTCCAGAGACCGACCTCAACAAGGTCCTTGAG--AAGCCAGGGGTTGACAATCTGGAACT 325980 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 | |||| || || || || || |||||||| ||| || || ||| | || || Sbjct 325979 CACCGGCAAGAACTCGTCGAGAGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGA 325920 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCA 65558 ||| ||||| || | ||||| ||||| ||||| |||||||||| || |||||||||| Sbjct 325919 AGCCGAGAATCTGAGAGGTAGAAGCAGTGGGCATAGGAGCGACCAGCAGAGAGTTTCGCA 325860 Query 65559 ATCCGTTCATTTCAATGTTGTGACGCAAT-TCGTCCCAGTTCCACA--TCGGTTTATCGT 65615 |||| | | ||| ||| ||| | |||||||| | ||| | ||||| | Sbjct 325859 GACCGTGCTTGACAACCTTG-GACTTGAGGTCGTCCCACTCCCAGAGCTCGGTG----GG 325805 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 || | || |||||| || |||||| ||| | ||| || || || ||| Sbjct 325804 GGAAA----CGTTCCACATGTCGAACTGCAGGTCTCCCTTGGAGGCAGGAGAGCCCTGGA 325749 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCGAGTGCGGCAAAA 65734 | | ||||| | |||||||| |||| | | | || || ||||| || | Sbjct 325748 AGGTCTCGTAGGCACCCTCCTCAATGGCCATCTCCATAGA-GGCCTCGACGGCTCCGTGG 325690 Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 || ||||||||||| || | || || ||| | ||||| ||| ||| | || | Sbjct 325689 TAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCGTCGGACTCAAAGGGGAG 325631 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || || | || || || |||||||| || || || | | ||||||| || || || Sbjct 325630 ACGCAGAGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCGATGGGTCGGTGTCG 325571 Query 65854 CAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCA 65912 || ||||| | ||| | |||| || || |||||||| || ||||| ||| || | Sbjct 325570 CATGTTGGA-CTTCTTGGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATGATGGCGTTGA 325512 Query 65913 AATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATC--AAAATGTTTAGG 65970 || || | || | | ||| ||| | | ||| || | || | | || Sbjct 325511 GGTTTCGCACAATGACCTTGGCAATATCATGCAGCTTCTTGAAGTCGTAGAACGAGTTGG 325452 Query 65971 ACGA-TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 | || |||| ||| || |||| || |||| || || |||||||||| Sbjct 325451 TCTCGTCTCGAGT---------CACGAAAGTGGGCAGAGCAATGGAGGCCAGGTTGCAGA 325401 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT- 66088 | || | ||| || |||| | ||||||||||| ||| ||||| || | || | Sbjct 325400 CGGCAACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTG--GAAGACTT 325343 Query 66089 -ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 ||||| |||| |||| || || ||| || ||||| | |||||||| | |||| | Sbjct 325342 GATGGTTCCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAA 325283 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 || | |||| ||| ||| | || | ||| || ||| || | || | Sbjct 325282 GGGGTTTCCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGAT 325223 Query 66208 CGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCAC 66266 || ||| | ||| | || | || ||||| || ||||| || | | ||| |||| Sbjct 325222 GGTTCGT-CGGCCTCGTCCCTCTCGCTCGTACTGCTCGTACAGCTTCTTGAACTCGTCAC 325164 Query 66267 CCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 | | || ||| |||| || |||| || || ||||| || | ||| || || | || Sbjct 325163 CGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCACTCGCCGTTCT 325104 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || || || ||| || || || || ||||| ||||| ||| || || || |||| Sbjct 325103 GCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAGGTCTCGGGCTC 325044 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | |||||| | ||||| || || |||| ||| |||||| ||||||||| | |||| Sbjct 325043 GGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCC 324984 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | || || ||||| ||||| || | || || ||| ||||| ||||| ||||| | Sbjct 324983 AAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTGGTCAACGTATC 324924 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 | || |||||| |||| || | ||| || |||| ||||| || | || ||||||| Sbjct 324923 GGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTGC 324864 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 || | ||| ||| || || || || | ||| | ||||| ||||| ||||| | Sbjct 324863 CGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGATACCTCCGGCAG 324804 Query 66627 TCTTCGAGATGGCAGCACAATCGGCC---ACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 ||| |||||| |||||| || | | || | | |||||||| |||||||| Sbjct 324803 ACTTGGAGATGAGAGCACA---GGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGT 324747 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| ||| | | |||| | || ||| | ||||| | ||| || | || | ||| Sbjct 324746 CCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGA 324687 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 | ||||| | |||||| || ||||| | | |||||||| ||||| ||||| ||| | Sbjct 324686 GAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAGTTGTAGGTCTCAATGGCCC 324627 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863 ||||||| || || || || |||| | |||||| | | | || || || | Sbjct 324626 GGGCAATGTTGTCACCGTGGATACCGACAGAGACTCGCATGATCATCTGCTGGGGTCGCT 324567 Query 66864 CGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 || | | | | ||| |||| | | | ||| | || ||||||||||||| |||||| Sbjct 324566 CGGCAA-CAGCTCCGTTGACTCGAAGCAGGTATGCTCGCTCCAGGGTCTTGAAGCCAAAG 324508 Query 66923 TA 66924 || Sbjct 324507 TA 324506 >seq6 Length=2655350 Score = 262 bits (290), Expect = 3e-65 Identities = 580/861 (67%), Gaps = 14/861 (2%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| || |||| | || ||||||| |||||||| ||||| || ||||| |||||| Sbjct 574332 TTCCCTATTCAGTACCATGAGATTTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG 574391 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG---CGTTTATCGAGC 61182 || | |||||| | ||| | ||| || ||| ||||||||| || | ||| Sbjct 574392 ACCGCCGAGGAGATTGATCTCGGCAAGGATATGGGCGACTGGGAGAACCGGCTCAACAGC 574451 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 | || | ||||||| || ||| |||| |||||||| || || |||||||| ||| Sbjct 574452 GACGAGAAGTTTTTCATTTCGCACGTGCTGGCTTTCTTTGCTGCCTCTGACGGTATTGTC 574511 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 || ||||| | | || || ||| | ||||| || | | ||||| || ||| Sbjct 574512 AACGAGAACCTGGTTGAGCGGTTCTCTGGAGAGGTTCAGGCTCCTGAGGCCAAGTGCTTC 574571 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 ||||| |||||||| |||||||| |||| || |||| ||| | | ||||| ||| Sbjct 574572 TACGGATTCCAGATCATGATGGAGAACATCCATTCCGAGACCTACTCTCTGCTCATTGAT 574631 Query 61363 ACGTACATCAGGGAGCGGGCGGAACGTGAACGAT--TGTTCAATGCCATCGAGACGATAC 61420 || ||||||| ||| | ||| || ||| ||||||| ||||| ||||| || | Sbjct 574632 ACTTACATCAAGGACCCCAAGGAGCG--AACTTACCTGTTCAACGCCATTGAGACCATTC 574689 Query 61421 CGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACA 61479 | | ||| ||| || || ||||| |||| |||||| || | || | | |||| Sbjct 574690 CCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCCGACGACGA-GTCTACC 574748 Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 ||||| || ||| | | || ||||| | || |||||| | || ||| ||||| ||| Sbjct 574749 TTTGGCGAGCGACTTATCGCCTTTGCTGCCGTTGAGGGTATTTTCTTCTCCGGATCTTTT 574808 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 ||| | || || ||| | ||||| || || || ||||| || ||||||||| ||| ||| Sbjct 574809 GCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGCCTGACCTTCTCCAACGAG 574868 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTAT 61659 | || || || || ||||| |||| || ||||| | |||| ||| | | Sbjct 574869 CTCATTTCTCGAGATGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCAC--- 574925 Query 61660 CTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATC 61719 || | ||| || || || || || ||| | || | || ||||| || || Sbjct 574926 CTCGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATT 574985 Query 61720 GAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCA-CTCATCGGCATGAATTGTGGACT 61778 || ||||| || || ||||| ||| | ||| | | || |||| ||||| || Sbjct 574986 GAGCAGGAGTTCCTTACTGATGCTCT-CCCTTGTGGTCTGCTCGGTATGAACGCCAAGCT 575044 Query 61779 AATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCG 61838 ||| ||||| ||||| ||||| |||||||||||| | || | | | || | Sbjct 575045 CATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGGAAACCCCAA 575104 Query 61839 GATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGAC 61898 | |||| || | | ||||| ||||| |||||||| | ||||| |||| ||| ||||| Sbjct 575105 GGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCTGGAAAGAC 575164 Query 61899 GAATTTTTTCGAGAAACGTGT 61919 || || |||||||| || || Sbjct 575165 CAACTTCTTCGAGAAGCGAGT 575185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567907938160