Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 322 4e-83 seq2 293 2e-74 seq3 122 7e-23 >seq5 Length=2767003 Score = 322 bits (356), Expect = 4e-83 Identities = 616/898 (69%), Gaps = 16/898 (2%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| | || || || || | ||||||||| |||| | || || |||| |||||| Sbjct 1871842 GAGAACCACCGCCGGTTTGTGCTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTAC 1871901 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| || ||||| |||||||| | |||||| | ||| | ||| |||||| Sbjct 1871902 AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGC 1871961 Query 61162 GACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218 ||||||||| || | | || || | ||||| || ||| |||| ||| Sbjct 1871962 GACTGGGAGAACCGGCTCAACAACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTC 1872021 Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTG 61278 ||||| ||||| || ||||| || || ||||| | |||| || ||| | |||||| Sbjct 1872022 TTTGCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTG 1872081 Query 61279 CAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCG 61338 || || | ||||| || ||||||||||||||||| |||||||| |||||||| Sbjct 1872082 CAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCG 1872141 Query 61339 GAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA-TT 61397 || | |||| | || ||||| || ||||||| ||| | ||| || | | | | Sbjct 1872142 GAAACGTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAGGAGCG-AACCTACCT 1872200 Query 61398 GTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTG 61457 |||||| ||||||||||| || || | ||| ||| || || ||||| |||| || Sbjct 1872201 GTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTG 1872260 Query 61458 GATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||| || | || | | | || ||||| || || || | || ||||| | ||||||| Sbjct 1872261 GATCTCCGACGACGA-GTCGACCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGG 1872319 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | || ||| || ||||| ||| | ||||| ||| | ||||| || || || |||| Sbjct 1872320 GCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGC 1872379 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 |||| || |||||| ||| ||| | || || || |||||||| |||| || |||| Sbjct 1872380 CCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTG 1872439 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGT---GGGTG 61693 | | |||| ||| ||| | || | ||| || || || || || ||| || | Sbjct 1872440 CCTGTCTGCTCTTC--TCGC-ACCTCGAGAACCGACCCTCCAAGAAGATTGTCGAGGACG 1872496 Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 |||||| ||||| || |||||| ||||| || ||||| |||||| ||||| | Sbjct 1872497 TGATTGT---CGAGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCG 1872553 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 ||| |||| ||||| || |||| ||||| ||||| ||||| |||||||||| Sbjct 1872554 GACTGCTCGGAATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTC 1872613 Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 || |||| | | | || | | |||| || | | ||||| || || ||||||| Sbjct 1872614 TGCTGGTTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGG 1872673 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | | || ||||||| |||||||| || || |||||||| || || |||||| || Sbjct 1872674 AGAACATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTACCA 1872731 >seq2 Length=4160336 Score = 293 bits (324), Expect = 2e-74 Identities = 1212/1873 (65%), Gaps = 64/1873 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||| ||||||||||| | ||||| ||| |||| | || |||||||| |||||| Sbjct 4112173 TCGATGGTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTC 4112114 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| || ||| | ||||| ||||| || | | | |||| | | || || Sbjct 4112113 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAAG-TGAGCTTGCCCATGGTGGGGTC 4112055 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || || || | ||||| ||| || ||| | | || || |||||||| Sbjct 4112054 CTTGATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAGGGGGATCGGTCGGCAGCCAT 4111995 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 || ||||| || | || || |||||||| ||||||||||||||| | ||| Sbjct 4111994 CTCGATGATTCG-CTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCT 4111936 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 || || | |||| ||| || || || | || || | || || || ||| Sbjct 4111935 GGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCG-GCCACGATTCGGTTCTTCATG 4111877 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | ||| ||||| ||| | || | || | |||| | || | | |||| | | Sbjct 4111876 GTCTCGTTCCACAGACCAACCTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACAATCT 4111819 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||| || | || || || || || |||||||| ||| ||| || ||| | | Sbjct 4111818 GGAACTCACCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACT 4111759 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | || ||| ||||| || | ||| || ||||| |||||||| || |||| || |||| Sbjct 4111758 CGTTGAAGCCGAGAATCTGAGAAGTGGAAGCAGTAGGCATGGGGGCCACCAGCAGCGAGT 4111699 Query 65553 TTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 |||||| ||| || |||| || ||| | |||||||| | ||| | | Sbjct 4111698 TTCGCATTCCAGTC--TTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAGAGC----- 4111646 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 ||| | | |||| ||||| || |||||| || | ||| || || || Sbjct 4111645 -TCGGAGGGAGTCACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCC 4111587 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 |||| | ||||| | || ||||| ||| | | | | ||| | || | Sbjct 4111586 CTGGAAGGTCTCGTAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACC 4111527 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTACG 65789 || ||||||||||| || | || || ||| | ||||| ||| |||| | | Sbjct 4111526 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCCTCGGACTCGAAGG 4111468 Query 65790 GCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 ||| | | || || || || || |||||||| || || || | | | ||||| || Sbjct 4111467 GCAGTCGGAG--GGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCG 4111410 Query 65848 ATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 || |||| ||||| | ||| | ||||||| ||||||||||| || || || ||| Sbjct 4111409 GTGTCGCATGTTGGA-CTTCTTGGCCTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGG 4111351 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC--AAAAT 65963 || | || || | ||| | | ||| ||| ||| | | ||| || | || Sbjct 4111350 CGTTGAGGTTTCGCACAATCACCTTGGCAATATCGT-GCAGCTTCTTGAAGTCGTAGAAG 4111292 Query 65964 GTTTAGGACGA-TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | | || | || ||||| ||||| |||| || || | || || ||| Sbjct 4111291 GAGTTGGTCTCGTCTCGAGTG---------ACAAAGGTGGGCAGAGCGATGGAAGCCAGG 4111241 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 ||||||||||| | ||| ||||||| | ||||||||||| ||| ||||| || | Sbjct 4111240 TTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTG--G 4111183 Query 66083 CAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACA 66140 || | ||||| |||| |||| ||| || ||| || ||||| || |||||||| | Sbjct 4111182 AAGACTTGATGGTACCCAGGTTCTTTTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGA 4111123 Query 66141 TCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTG 66200 |||| | || | |||| ||| ||| | || | ||| || ||| || | | Sbjct 4111122 GCATGAAGGGGTTACCGGACTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCTTCTGGG 4111063 Query 66201 CCTTCACCGTACGT--ACC---GCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | | || ||| ||| ||||| |||| ||||| || ||||| || || | Sbjct 4111062 CAGGGATGGTTCGTCGACCTCGGCCCT-CCTTC----TCGTACTGCTCGTACAGCTGCTT 4111008 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA 66315 ||| ||||| | || || || | || |||| || || ||||| || | ||| Sbjct 4111007 GAACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCA 4110948 Query 66316 ATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 || | | ||| || || || ||| || || || || |||||||| || ||| || Sbjct 4110947 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAG 4110888 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| || ||||| |||||| | ||||| || || |||| ||| |||||| |||| Sbjct 4110887 ATCTCGGGCTCGGATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAC 4110828 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 ||| | ||||| || |||||||| ||||| || | || || ||| ||| || || Sbjct 4110827 GTCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTG 4110768 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 ||||||||| |||||| |||||| ||||||||| ||| || |||| ||||| || | Sbjct 4110767 GTCGACGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGT 4110708 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAAT 66615 || ||||| ||| | ||| |||||| || || || | ||| | ||||||||| Sbjct 4110707 ACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACCAAT 4110648 Query 66616 ACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCA 66673 ||| || || | ||| |||||| ||||||| || | |||| | | |||||||| Sbjct 4110647 ACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTC--GTAGATGCCGTCG 4110590 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCG 66733 |||||||| |||| ||| | | ||| | || || | ||||| | ||| || | Sbjct 4110589 ATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCT 4110530 Query 66734 GCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTC 66793 || | | ||||| || | |||||| || ||||| | |||||||||| ||||| ||| Sbjct 4110529 GCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGTC 4110470 Query 66794 TCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTA 66852 || ||| | ||||||| ||||| || || |||| | ||| |||||| | | | Sbjct 4110469 TCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGACAGACAC-TCGCATGATCATCTG 4110411 Query 66853 TTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911 || || || ||| || | | || |||| ||| | ||||| || |||||||||| Sbjct 4110410 CTGGGGTCGCTCG-GCAACAGCGCCGTTGACTCGCAGCAGGTAGGCTCGCTCCAGGGTCT 4110352 Query 66912 TGATACCAAAGTA 66924 ||| |||||||| Sbjct 4110351 TGAAGCCAAAGTA 4110339 >seq3 Length=2943663 Score = 122 bits (134), Expect = 7e-23 Identities = 432/658 (66%), Gaps = 28/658 (4%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||||| || | || | ||| || |||||||| || || | ||| || || | | Sbjct 1831864 ACAAACTCAGGCAAAGCTACAGACGCCAGGTTGCACACCGCCACCTCTTCGGGTGACGAG 1831923 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGT-ATGGTGCCCAAATTCTGTTGATT 66111 |||| ||| ||||| ||||||||||| | | | | |||||||||| ||||| || || Sbjct 1831924 TACTGGACGATTTCCGTGCACAGATT-CGACGACTTGATGGTGCCCAGGTTCTGCTGGTT 1831982 Query 66112 --ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 ||| ||||| ||||| |||||||| | |||| |||| ||||| || | || Sbjct 1831983 GGACT-TTGCG-TTGCAGCTGTCCTTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTG- 1832039 Query 66170 GACTCA--ATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC-GTACGT---ACC-GCCCT 66222 |||| | ||| || | | || | | || || | | | ||| || ||||| Sbjct 1832040 -ACTCGTGAGGATCGCCTTGAACAGCTCCTGCGCGTTGATCTGCGCGTTGAACAAGCCCT 1832098 Query 66223 ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA---CCCCATACTTCGGA 66279 ||| | ||||| | ||||| || || || ||| ||||| || || Sbjct 1832099 ---TTTTC--TCGTACTCCTCGTATTTCTGCTCAAAC---TCAGGTCCCCACACGTCTTC 1832150 Query 66280 CAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACG 66339 ||| | || ||| | |||||| | || ||||| | | | ||| || || Sbjct 1832151 CAGCCCAGGGGCCTTCTTTGGACAGAACAAGGACCACTTTTCGCCTCTTTCGACCCGCTT 1832210 Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || || || || | ||| | |||||||| || || | ||||| | |||||| Sbjct 1832211 CATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCCTCTGC 1832270 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 ||||| ||||| |||| || ||||| || | || ||||||||||| || ||||| || Sbjct 1832271 TCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAGAATATCGGCATGCCAGGGCTCCAGATA 1832330 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 |||||| |||| || ||| ||| ||||| |||||||| || || ||| ||||| Sbjct 1832331 GATGGCAAACGCTCCGGGACGCTTGTTTCCACCCTGGTCGACATACCGTGCGGTGTTGTT 1832390 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG-GGGG 66578 ||| || | | ||| || || | || | || | || | | || ||| | Sbjct 1832391 GAACACCCTGAGCATGGGAACAATGCCACTGGACCTTCCTTGAGACCCAGTAATGATAGC 1832450 Query 66579 ATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 | ||| | |||| |||| |||| || |||||| ||||| || ||||| |||||||| Sbjct 1832451 ACCCTTG-GCCCTGATATTATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGAT 1832507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567801340240