Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 2e-18
seq2 89.7 2e-12
>seq3
Length=2943663
Score = 109 bits (120), Expect = 2e-18
Identities = 115/148 (78%), Gaps = 4/148 (3%)
Strand=Plus/Minus
Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489
|||||||| |||||||||| | | |||||||||||||| || ||||| || || || ||
Sbjct 394900 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGATACCCTCGGCC 394841
Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548
| ||| |||||||| ||| | || ||| | | ||||||||| ||||| || | | ||
Sbjct 394840 GAAAACGGCATATCCTCGTGTCGGTACG-TCACACCAATGGTACCCTTCTGTCCGTGACG 394782
Query 364549 AGAAGCAAACTTGTCGCCAATGACTGGG 364576
|| ||||||||||| ||||| |||||
Sbjct 394781 CGAGGCAAACTTGTCTCCAAT--CTGGG 394756
>seq2
Length=4160336
Score = 89.7 bits (98), Expect = 2e-12
Identities = 237/360 (66%), Gaps = 4/360 (1%)
Strand=Plus/Minus
Query 12688 CAGAGTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAA 12747
|||||||| ||| ||||| | | || ||| | || ||| || ||||| |||
Sbjct 1934920 CAGAGTAGGCACCTGCTTGGCGGTACCCAGACCCATGATCATGATGACGTCGTAGTAGAT 1934861
Query 12748 AACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACC 12807
|| |||||||| | |||| || || ||||| | ||| || ||||| | || || ||
Sbjct 1934860 GACGTTCATGCCCATGGACTCGGCGAGAACAGACAGCTGGGAGCCAATATGGCCGTATCC 1934801
Query 12808 TACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG--AGAAGTCTTGTTCCAA 12865
|| || || |||||||| |||| | || | ||| |||| ||| |||||||||
Sbjct 1934800 CACAATTCCCAGGGTCTTGCCTCGGATCTCCCAGCA--CTTGGAAGACACCTTGTTCCAG 1934743
Query 12866 ATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGT 12925
| || ||| | || |||||| || || | |||||| || || | || | |
Sbjct 1934742 GTTCCGGCGTGCATCTCAATGTTTCGGTCGCCCAGCTGACGCGACAGCATGATGATCTCG 1934683
Query 12926 CCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATG 12985
| |||| |||||| || || || | |||| | ||||| || || || || |||||
Sbjct 1934682 CAGATGACGAGCTCGGCGACAGATCGGGAGTTGGAGAAGGGCGAGTTGAACACGGCAATA 1934623
Query 12986 CCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTATG 13045
|| |||| || || |||| ||||| | | || ||||||||||| || |||
Sbjct 1934622 CCGTTGTTGGCGGCGTACTCCAGATCGACCTGGTTGGTGCCGATGCAGAAGCAGCCAATG 1934563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885409845613
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |