Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 307 8e-79 seq2 273 2e-68 seq5 84.2 2e-11 >seq3 Length=2682169 Score = 307 bits (340), Expect = 8e-79 Identities = 615/900 (68%), Gaps = 20/900 (2%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| | || || || || | ||||||||| |||| | || || |||| |||||| Sbjct 1915741 GAGAACCACCGGCGGTTTGTGCTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTAC 1915682 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| || || || |||||||||| ||||| ||||| | ||| |||||| Sbjct 1915681 AAGAAGGCCGAGGCGTCGTTCTGGACGGCCGAGGAAATCGATCTCGGCAAGGACATGGGC 1915622 Query 61162 GACTGGGAG---CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTC 61218 ||||||||| || | | || || | ||||| || ||| |||| ||| Sbjct 1915621 GACTGGGAGAACCGGCTCAACAACGACGAGCGGTTCTTCATCTCCCACGTGCTGGCCTTC 1915562 Query 61219 TTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG--TTTCGCGCAGGAGG 61276 |||||||| |||||||| |||||||| ||||| | |||| || |||| || |||| Sbjct 1915561 TTTGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTGGAGCGGTTTTCCGGC--GAGG 1915504 Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 |||| | | ||||| || ||||||||||||||||| |||||||| |||||| Sbjct 1915503 TGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACT 1915444 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGA- 61395 |||| | ||| | || ||||| || ||||||| ||| | ||| || | | | Sbjct 1915443 CGGAAACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAGGAGCG-AACCTAC 1915385 Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 ||||||| ||||||||||| || || | ||| ||| || || ||||| |||| Sbjct 1915384 CTGTTCAACGCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAG 1915325 Query 61456 TGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 |||||| || | || | | | || ||||| || ||| | | || ||||| | || || Sbjct 1915324 TGGATCTCCGACGACGA-GTCCACCTTTGGCGAGCGACTCATTGCCTTTGCCGCCGTGGA 1915266 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| | |||||| || ||||||||| | ||||| ||| | ||||| || || || || Sbjct 1915265 GGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCAT 1915206 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 |||||| ||||||||| ||| ||| | || || || |||||||| |||| || || Sbjct 1915205 GCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACGGACTT 1915146 Query 61635 TGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGT---GGG 61691 ||| | |||| ||| ||| | || | ||| || || || || || ||| || Sbjct 1915145 TGCCTGTCTGCTGTTC--TCGC-ACCTCGAGAACCGGCCCTCCAAGAAGATTGTCGAGGA 1915089 Query 61692 TGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGT 61751 | |||||| ||||| || ||||| ||||| || ||||| ||||| | ||| Sbjct 1915088 CGTGATTGT---CGAGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGACGCGCTCCCCTG 1915032 Query 61752 CTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811 | || | |||||||| || |||| ||||| ||||| ||||| |||||||| Sbjct 1915031 CGGTCTGCTGGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCG 1914972 Query 61812 TCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCAT 61871 ||| |||| | | || | | |||| || | | ||||| || || ||||| Sbjct 1914971 GCTGCTGGTGGCCCTCGGAAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCAT 1914912 Query 61872 GGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 ||| | || ||||||| |||||||| || || |||||||| || || |||||| || Sbjct 1914911 GGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTACCA 1914852 >seq2 Length=2949780 Score = 273 bits (302), Expect = 2e-68 Identities = 1203/1870 (64%), Gaps = 58/1870 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||| ||||||||||| | |||||| ||| |||| | || ||||||||||||||| Sbjct 78827 TCGATGGTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATGCCGGTC 78886 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 ||||| || ||| | ||||| ||||| || | | | |||| | | || || Sbjct 78887 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGG-TGAGCTTGCCCATGGTGGGGTC 78945 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | || || || | ||||| ||| || ||| | | || || |||||||| Sbjct 78946 CTTGATGTGGATGTTGAGAGACTGGGACTGGTCAATGAAGGGGGATCGGTCAGCAGCCAT 79005 Query 65257 GTCAATGATACGACGTCC-CGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 || ||||| || | || ||| |||||||| ||||||||||||||| | ||| Sbjct 79006 CTCGATGATTCG-CTTCTGCGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCT 79064 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 || || | |||| ||| || || || | || || | || || || ||| Sbjct 79065 GGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCG-GCCACGATTCGGTTCTTCATG 79123 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | ||| ||||| || | || | || | |||| | || | | |||| | | Sbjct 79124 GTCTCATTCCACAGTCCGACCTCAACCAGGTCCTTGAGC--AGCCAGGGGTTGACAATCT 79181 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| | || || || || || |||||||| ||| ||| || || | | Sbjct 79182 GGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAACACT 79241 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | || ||| ||||| || | || || || || |||||||| || |||| || |||| Sbjct 79242 CGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCACCAGCAGCGAGT 79301 Query 65553 TTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 |||||| |||| || |||| || ||| | |||||||| | ||| | | Sbjct 79302 TTCGCATTCCGGTC--TTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAGAGC----- 79354 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 ||| | | |||| ||||| ||| |||||| || | ||| || || || Sbjct 79355 -TCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCC 79413 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 |||| | ||||| | || ||||| ||| | | || || ||| | || | Sbjct 79414 CTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGGCCATCTCGTAGGAGGCCTCAACGGCTCC 79473 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCATCGCTCTCGTACG 65789 || ||||||||||| || | || || ||| | ||||| ||| ||| | | Sbjct 79474 GTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTG-GCCTCCTCGGACTCAAAGG 79532 Query 65790 GCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 | | | | || || |||||||| |||||||| || || || | | | ||||| || Sbjct 79533 GAAGTCGGAG--GGCCATGAAAGTGTCAGCCAGACCCTGGACACCCAGAGCAATGGGTCG 79590 Query 65848 ATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCGATAATGC 65906 || |||| ||||| | ||| | |||| || || |||||||| || ||||| ||| Sbjct 79591 GTGTCGCATGTTGGA-CTTCTTGGCCTCGGGGACGGGGTAGTAGTTTCGGTCGATGATGG 79649 Query 65907 GATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATC--AAAAT 65963 || | || || | ||| | | ||| ||| ||| | | ||| || | || Sbjct 79650 CGTTGAGGTTTCGCACAATCACCTTGGCAATATCGT-GCAGCTTCTTGAAGTCGTAGAAC 79708 Query 65964 GTTTAGGACGA-TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | | || | || ||||| ||||| | || || |||| || || ||| Sbjct 79709 GAGTTGGTCTCGTCTCGAGTG---------ACAAAAGTAGGCAGCGCAATGGAGGCCAGG 79759 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 |||||||| || | ||||||||||| | ||||||||||| ||| |||||| || Sbjct 79760 TTGCAGACGGCCACCTCGTCAGGAGACGAGTACTCGACAATCTCGCAGCACAGGTTGGAC 79819 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | || || |||| |||| || || ||| || ||||| | |||||||| | | Sbjct 79820 GACTTGATAGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGC 79879 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA----GCGCG 66198 ||| | || |||||| ||| || | || | ||| || ||| || | ||| Sbjct 79880 ATGAAGGGGTTGCCGGACTCGGTCTGACAGTCCAGAATGTGGTACCACAGCTTCTGGGCG 79939 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAA 66258 | | ||| | || || |||| ||||| || ||||| || || | ||| Sbjct 79940 GGGATGGTTCGTCGGCCTCGGCCCTCCTTC----TCGTACTGCTCGTACAGCTGCTTGAA 79995 Query 66259 GGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 || || | || || || | ||||||| || || ||||| || | ||| || Sbjct 79996 CTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCACTC 80055 Query 66319 ACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 | | ||| || || || ||| || || || || |||||||| || ||| ||||| Sbjct 80056 GGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATC 80115 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 || ||||| |||||| | ||||| || || |||| ||| |||||| |||| ||| Sbjct 80116 TCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTC 80175 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 | | ||||| || |||||||| ||||| || | || || ||| ||| || ||||| Sbjct 80176 GTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGTC 80235 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 |||||| |||||| |||||| | || |||| ||| || |||| ||||| || | || Sbjct 80236 GACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTCC 80295 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 ||||| || ||||| ||| || || || || | ||| | ||||||||| || Sbjct 80296 GTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGCC 80355 Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATG 66676 || || | ||| || ||| ||||||| || | | |||| | | |||||||| ||| Sbjct 80356 TCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTC--GTAGATGCCGTCGATG 80413 Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736 ||||| |||| ||| | | |||| | || || | ||||| | ||| ||| | || Sbjct 80414 GAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGCG 80473 Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796 | | |||||||| | ||| || || ||||| | |||||||||| ||||| |||||| Sbjct 80474 TTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGTCTCG 80533 Query 66797 ATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTG 66855 || | |||||| ||||| || || |||| | ||| |||||| | | | || Sbjct 80534 ATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACAC-TCGCATGATCATCTGCTG 80592 Query 66856 AGGCCGTTCGACCAGCCG-ATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||| | || | || | | | | |||| ||| | ||| | || ||||| ||||||| Sbjct 80593 AGGTCTCTC-AGCAACGGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651 Query 66915 TACCAAAGTA 66924 |||||||| Sbjct 80652 AGCCAAAGTA 80661 >seq5 Length=1963011 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 |||||||||| | | || || || | || |||||||||||| ||| || ||| | || Sbjct 1038358 AACTCGCCGGCCTGCACTCGCCGCAGGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCG 1038299 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||| ||| || || |||| ||||| || || ||||||||||| |||| || ||||| Sbjct 1038298 TTGTGGCCGAGGATCTGGGAGGTAGAAGCGGTAGGCATGGGAGCCACCAGCAGCGAGTTG 1038239 Query 65555 CGCA 65558 |||| Sbjct 1038238 CGCA 1038235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567811030960