Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 3e-11
seq4 84.2 9e-11
>seq3
Length=2682169
Score = 86.0 bits (94), Expect = 3e-11
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 349074 CGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGG 349133
||| |||||||||||| || | |||| || || ||||||||||||| || || ||||
Sbjct 1011048 CGTTGAGAATCTCCTTCAGACGAGGCACACCGAGAGTCACGTTCTTGGACGACACACCGG 1011107
Query 349134 CAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGA 349193
| | |||||||| | || |||| ||| ||| ||||| || ||| |||| | || |
Sbjct 1011108 CGTAATGGAAGGTGTTCAGCGTCATCTGAGTGGCAGGCTCTCCAATGGACTGCGCAGCAA 1011167
Query 349194 GGATGCCTACCATCTCGCCGGG 349215
|| || ||||| || |||||
Sbjct 1011168 TGACACCAACCATTTCTCCGGG 1011189
>seq4
Length=2201853
Score = 84.2 bits (92), Expect = 9e-11
Identities = 143/203 (70%), Gaps = 7/203 (3%)
Strand=Plus/Plus
Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065
||||| || || ||| | | || |||||||| |||||||| || | | ||| |
Sbjct 1116158 GTCATACGAGAGGGGAAACCGTGGGGGTTCATAATGATGTCAGGGCACACTCCGCTATCA 1116217
Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125
|||||||||||||||| ||||||| | | ||| || |||||||| ||||| ||
Sbjct 1116218 CTGAAGGGCATGTCCTCCTGGTTGACAATGATACCGCACACACCCTTCTGTCCGTGACGA 1116277
Query 449126 CTGCAGAACTTGTCCCCCTGCTCGGG--CTTGCGTGTGAAGCGCAGCACGATCTTGATGG 449183
|||||||||| ||| ||||||| | | || ||| || |||| || |||||| |
Sbjct 1116278 GACGAGAACTTGTCTCCCAGCTCGGGTCGTCGAGTCTGA--CGAAGCAGGACCTTGAT-G 1116334
Query 449184 AGCGGAAGCCGTCCCTGTTGGTG 449206
|| | ||| ||| ||| ||||
Sbjct 1116335 AGATGCAGC--TCCTTGTCGGTG 1116355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738132874122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |