Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 3e-16
seq10 91.5 6e-13
>seq2
Length=2949780
Score = 102 bits (112), Expect = 3e-16
Identities = 217/322 (67%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 12726 TCTTGAGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCT 12785
|| ||| || ||||| ||| || ||||| || | |||| || || || || | ||
Sbjct 2269753 TCATGATGACGTCGTAGTAGATGACGTTCATTCCCATGGACTCGGCGAGAACGGACAGCT 2269812
Query 12786 GAGAACCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAAC 12845
| || ||||||| || || || || ||||| |||||||| |||| | ||| | |||
Sbjct 2269813 GGGAGCCAATGTGGCCGTATCCCACAATACCCAGGGTCTTGCCTCGGATTTCCCAGCA-- 2269870
Query 12846 CTTG--AGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTG 12903
|||| ||| ||||||||| | || ||| | || |||||| ||||| | |||
Sbjct 2269871 CTTGGAAGAGACCTTGTTCCAGGTTCCGGCGTGCATCTCAATGTTTCGGTCTCCCAGCTG 2269930
Query 12904 ACGAGAAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAA 12963
||| || || | || | | | |||| |||||| || ||| || | |||| | ||
Sbjct 2269931 ACGCGACAGCATGATGATCTCACAGATGACGAGCTCGGCGACGGATCGGGAGTTGGAGAA 2269990
Query 12964 GGGAGAATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTA 13023
||||| || || || ||||| || |||| ||| || |||| ||||| | |
Sbjct 2269991 AGGAGAGTTGAACACGGCAATACCGTTGTTGGCAGCGTACTCCAGATCGACCTGGTTGGT 2270050
Query 13024 ACCAATGCAGAAGCATCCTATG 13045
|| ||||||||||| || |||
Sbjct 2270051 GCCGATGCAGAAGCAGCCAATG 2270072
>seq10
Length=888286
Score = 91.5 bits (100), Expect = 6e-13
Identities = 111/148 (75%), Gaps = 4/148 (3%)
Strand=Plus/Plus
Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489
|||||||| |||||||||| | | |||||||||||||| || ||||| | || || ||
Sbjct 502081 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGACACCCTCGGCC 502140
Query 364490 GTAAAGGGCATATCTTCG-GGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548
| ||| ||||| || ||| | | | | | | ||||||||| ||||| || | | ||
Sbjct 502141 GAAAACGGCATGTCCTCGTGTCTGTAAG-TCACACCAATGGTACCCTTCTGTCCGTGACG 502199
Query 364549 AGAAGCAAACTTGTCGCCAATGACTGGG 364576
|| ||||||||||| ||||| |||||
Sbjct 502200 CGAGGCAAACTTGTCTCCAAT--CTGGG 502225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885458145827
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |