Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20bailii_20[genbank_20GCA_5F900162805.1_202017-06- 15] 105 sequences; 10,772,966 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq41 82.4 2e-11 >seq41 Length=779275 Score = 82.4 bits (90), Expect = 2e-11 Identities = 227/340 (67%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGG- 1766 ||||| || ||||||||||| | || || ||| | |||||| ||| | ||| | Sbjct 290863 GACTCTCGTGGTAACCCAACCGTCGAGGTTGAATTGACCACTGAGAAGGGTACTTTCAGA 290922 Query 1767 TCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGA 1826 || ||| || || || || || || ||||||| ||||| || | ||| | | || Sbjct 290923 TC----TATTGTCCCATCTGGTGCTTCCACTGGTGTTCACGAGGCTCTTGAATTGAGAGA 290978 Query 1827 TGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACAA 1886 |||||||| | | |||||| ||| || || |||| |||||| ||| | Sbjct 290979 CGGTGACAAGAAGAGATGGGGTGGTAAGGGTGTCTTGAAGGCCGTTGCTAACGTCAACGA 291038 Query 1887 CGTTATTGCTG-AGCACATCATCGGATTCGACGT--ACGT----GATCAACAAGGTATTG 1939 | | ||||| ||| | ||||| | |||| |||| || ||| ||| | ||| Sbjct 291039 CATCATTGCCCCAGC-CGTCATCAAGGCCAACGTTGACGTCAAAGACCAAGAAGCTGTTG 291097 Query 1940 ACCGCGCAAT-GATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCT 1998 || || | || || | | ||||||||||| ||||| ||||| || ||||||||||| Sbjct 291098 AC-GCTCTATTGAACAAGTTGGACGGTACTCCTAACAAGGGTAAGCTAGGTGCCAACGCC 291156 Query 1999 ATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTG 2038 |||| ||||| || || |||| || | || || |||| Sbjct 291157 GTTCTAGGTGTTTCCATGGCTGCCGCCAGAGCTGCCGCTG 291196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156038205439620