Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq11 324 2e-86 seq3 324 2e-86 seq1 129 9e-28 >seq11 Length=1516135 Score = 324 bits (358), Expect = 2e-86 Identities = 230/261 (88%), Gaps = 7/261 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1507876 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1507935 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---- 117 |||||||||||||||||||||||| |||| ||| || ||||||||||||||||| Sbjct 1507936 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGAAA 1507995 Query 118 AGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | ||| ||| || | | |||||||| |||||||||||||||||||||||| || Sbjct 1507996 AACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAA 1508052 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 1508053 TTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCA 1508112 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 1508113 AGAAAGAGCTCTCAATCTGTC 1508133 >seq3 Length=1115933 Score = 324 bits (358), Expect = 2e-86 Identities = 230/261 (88%), Gaps = 7/261 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 945356 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 945415 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---- 117 |||||||||||||||||||||||| |||| ||| || ||||||||||||||||| Sbjct 945416 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGAAA 945475 Query 118 AGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | ||| ||| || | | |||||||| |||||||||||||||||||||||| || Sbjct 945476 AACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAA 945532 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 945533 TTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCA 945592 Query 238 AGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||| Sbjct 945593 AGAAAGAGCTCTCAATCTGTC 945613 >seq1 Length=2110500 Score = 129 bits (142), Expect = 9e-28 Identities = 114/141 (81%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 90 TGGAAGCCAATAGTCCCTCTAAGAAGCC-AGCCACCAACCATAGTCGATGGGGCTATTTA 148 ||||| || ||||||||||||||||| | |||| | | | | ||||||| Sbjct 1036703 TGGAAACCGATAGTCCCTCTAAGAAGTGGAAGAACCAGCAAATGCTAACACCACTATTTA 1036644 Query 149 GCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGA 208 | |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| Sbjct 1036643 GTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATGACTCCACCAACTAAGG 1036584 Query 209 ACGGCCATGCACCACCACCCA 229 |||||| ||||||||||| || Sbjct 1036583 ACGGCCGTGCACCACCACTCA 1036563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799861058