Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20parabailii_20[genbank_20GCA_5F001984395.2_202017 -03-16] 18 sequences; 20,864,403 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 2e-12 >seq2 Length=1189704 Score = 86.0 bits (94), Expect = 2e-12 Identities = 228/340 (67%), Gaps = 15/340 (4%) Strand=Plus/Minus Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGG- 1766 ||||| || ||||||||||| | || || ||| | |||||| ||| | ||| | Sbjct 883062 GACTCTCGTGGTAACCCAACCGTCGAGGTTGAATTGACCACTGAGAAGGGTACTTTCAGA 883003 Query 1767 TCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGA 1826 || ||| || || || || || || ||||||| ||||| || | ||| | | || Sbjct 883002 TC----TATTGTCCCATCTGGTGCTTCCACTGGTGTTCACGAGGCTCTTGAATTGAGAGA 882947 Query 1827 TGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACAA 1886 |||||||| | | |||||| ||| || || |||| |||||| ||| | Sbjct 882946 CGGTGACAAGAAGAGATGGGGTGGTAAGGGTGTCTTGAAGGCCGTTGCTAACGTCAACGA 882887 Query 1887 CGTTATTGCTG-AGCACATCATCGGATTCGACGT--ACGT----GATCAACAAGGTATTG 1939 | | ||||| ||| | ||||| | |||| |||| || ||| ||| | ||| Sbjct 882886 CATCATTGCCCCAGC-CGTCATCAAGGCCAACGTTGACGTCAAAGACCAAGAAGCTGTTG 882828 Query 1940 ACCGCGCAAT-GATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCT 1998 || || | || || | | ||||||||||| ||||| ||||| || |||||||||||| Sbjct 882827 AC-GCTCTATTGAACAAGTTGGACGGTACTCCTAACAAGGGTAAGCTAGGTGCCAACGCT 882769 Query 1999 ATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTG 2038 |||| ||||| || || |||| || | || || |||| Sbjct 882768 GTTCTAGGTGTTTCCATGGCTGCCGCCAGAGCTGCCGCTG 882729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156038366646792