Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zygosaccharomyces_20rouxii_20[genbank_20GCA_5F001950435.1_202016-12- 08] 220 sequences; 19,469,227 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3 118 4e-21 seq1 102 3e-16 seq7 100 1e-15 seq16 89.7 2e-12 >seq3 Length=965618 Score = 118 bits (130), Expect = 4e-21 Identities = 197/282 (70%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 12767 TCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTACTATACCTAGGGTCTTT 12826 || ||||| || || | ||||||||| |||| |||||| || | ||||||| || || Sbjct 292346 TCCGCTAGAACGGATAACTGAGAACCGATGTGACCATAGCCGATAATACCTAAAGTTTTA 292405 Query 12827 CCTCTAACTTCACGGCAACCTTGAGAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTG 12886 || |||||||| | || | || || ||||||||| ||| ||||| ||| | Sbjct 292406 CCCCTAACTTCCCAACATCTGTGGGAGACTTTGTTCCAAGCACCTGTGTGTAATTCAATA 292465 Query 12887 TTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACG 12946 |||||| || | || | | ||| | || | || || ||||| | ||||| || Sbjct 292466 GATCTATCACCCAATTGTCTCGCTAGAGTGATAATTTCACCGATGATTAATTCTGCTACA 292525 Query 12947 CTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCT 13006 ||||||| |||| |||| ||||| || ||||||||||| ||| | || || | | Sbjct 292526 CTTCTAGAGTTGGAAAATGGAGAGTTGAAGACTGCAATACCTGCATGTGTTGCATATTTT 292585 Query 13007 AGATTAACCTGA-TCGTAACCAATGCAGAAGCATCCTATGCA 13047 |||| ||| ||| |||| |||||| ||||| || || || || Sbjct 292586 AGATCAACTTGATTCGT-ACCAATACAGAAACAGCCGATACA 292626 >seq1 Length=1375271 Score = 102 bits (112), Expect = 3e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 12736 ATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAAT 12795 |||||| | || || | ||| || | | || |||||||| || | ||||||||||| Sbjct 139851 ATCGTAGTATAACACATGCATACCCATAGCTTCCGCTAGGACGGATAATTGAGAACCAAT 139792 Query 12796 GTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGT 12855 || ||||||||| | ||||| | || || ||||||||||| | || | | ||| Sbjct 139791 GTGACCATAACCAATGATACCCAAAGTTTTACCTCTAACTTCCCAACACCTGTTGGAAAC 139732 Query 12856 CTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATT 12915 |||||||| ||| ||||||||| | |||||| || | || | | | | | Sbjct 139731 TTTGTTCCATGCACCTGTGTGTAGTTCGATAGATCTATCACCCAGTTGTCTGGCTAAACT 139672 Query 12916 AATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAA 12975 || | || || ||||| | || || || ||||||| ||| | || ||||| || || Sbjct 139671 GATGATTTCACCAATGATTAATTCCGCTACACTTCTAGAGTTAGAGAATGGAGAGTTGAA 139612 Query 12976 GACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAA 13035 || ||||| ||| | ||| || | ||||| ||| || | | |||||| ||||| Sbjct 139611 AACGGCAATACCTGCATGGGTGGCATATTTTAGATCAACTTGGTTGGTACCAATACAGAA 139552 Query 13036 GCATCCTAT 13044 || || || Sbjct 139551 ACAACCGAT 139543 >seq7 Length=903076 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||||||||| ||||||| ||||||||||||| | ||||| || || || ||||| Sbjct 342541 GTCATACGAGATGGAATGGCATGAGGGTTGATGATCAAATCAGGTACAATACCTTCAGCA 342482 Query 364490 GTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGA 364549 ||||| ||||||||||| | | | | | ||||||||| |||||||| | | ||| Sbjct 342481 GTAAATGGCATATCTTCTCTACCATAGGTAATACCAATGGTACCCTTTTGACCGTGACGA 342422 Query 364550 GAAGCAAACTTGTCGCCAAT 364569 || ||||| || || || || Sbjct 342421 GATGCAAATTTATCACCGAT 342402 >seq16 Length=577445 Score = 89.7 bits (98), Expect = 2e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||||||||| ||||||| ||||||| ||||| | ||||| || || || || || Sbjct 43262 GTCATACGAGATGGAATGGCATGAGGGTTAATGATCAAATCAGGTACAATACCTTCGGCA 43321 Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 ||||| ||||||||||| | | | | | | ||| ||||| |||||||| ||| || Sbjct 43322 GTAAATGGCATATCTTCTCTACCGTAAG-TAATACCGATGGTACCCTTTTGACCATGACG 43380 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 ||| |||||||| || || || Sbjct 43381 AGATGCAAACTTATCACCGAT 43401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884881086976460