Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20apicola_20[genbank_20GCA_5F001005415.1_202015-05-08] 40 sequences; 9,769,876 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq27 250 1e-63 >seq27 Length=4742 Score = 250 bits (276), Expect = 1e-63 Identities = 224/276 (81%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||| | | |||||| |||||||| |||||| Sbjct 3140 CCCGTCTTGAAACACGGACCAAGGAGTCCATTGCTTGCGCGAGTATTTGGGTGGCAAACC 3081 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 | | ||| | |||||| ||||| | |||| | ||| ||| |||| |||| Sbjct 3080 CATATGCGAAGTGAAAGCGAACGA---TTCCAACC--TTCGGGGGCAGAATCGGCCGA-- 3028 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 ||| | | | ||| |||||| |||| | || ||||||||||||||||||||| Sbjct 3027 CTGTT--CATAGGAACAGATTGAGTG-GAGCGCAAGTGATGGGACCCGAAAGATGGTGAA 2971 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2970 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 2911 Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||||||||||||| Sbjct 2910 GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2875 Score = 192 bits (212), Expect = 2e-46 Identities = 138/158 (87%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||| | | ||||||||||||| Sbjct 3437 GAGTCGAGTTGTTTGGGAATGCAGCTC-AAATGGGTGGTATGCTCCATCTAAAGCTAAAT 3379 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || |||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 3378 ATCTGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACTTTGAAA 3319 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||||| |||||| ||||||||||||||||| ||||| Sbjct 3318 AGAGAGTGAAAAAGTACGTGAAATTGTTGAAATGGAAG 3281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999142000