Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq87 275 9e-72
seq34 275 9e-72
seq5 275 9e-72
>seq87
Length=8252
Score = 275 bits (304), Expect = 9e-72
Identities = 201/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||| ||||| |||||||||||||||| |
Sbjct 7700 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGGTGACTTGCGCTTACTAGGAATT-C 7757
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| |||||||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 7758 CTCGTTGAAGAGCAACAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCCCAAGATT 7817
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 7818 TCCCAGGCCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 7874
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 7875 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 7923
>seq34
Length=339450
Score = 275 bits (304), Expect = 9e-72
Identities = 201/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||| ||||| |||||||||||||||| |
Sbjct 336514 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGGTGACTTGCGCTTACTAGGAATT-C 336571
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| |||||||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 336572 CTCGTTGAAGAGCAACAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCCCAAGATT 336631
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 336632 TCCCAGGCCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 336688
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 336689 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 336737
>seq5
Length=128131
Score = 275 bits (304), Expect = 9e-72
Identities = 201/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||| ||||| |||||||||||||||| |
Sbjct 127659 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGGTGACTTGCGCTTACTAGGAATT-C 127602
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| |||||||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 127601 CTCGTTGAAGAGCAACAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCCCAAGATT 127542
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| | ||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 127541 TCCCAGGCCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 127485
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 127484 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 127436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999278785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |