Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq34 587 3e-165 seq6 542 1e-151 seq7 145 3e-32 >seq34 Length=339450 Score = 587 bits (650), Expect = 3e-165 Identities = 521/651 (80%), Gaps = 53/651 (8%) Strand=Plus/Minus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 |||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| ||| Sbjct 335780 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCT 335721 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 |||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||| Sbjct 335720 AAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTT 335661 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 | ||||||||| ||| || ||||||||||||||||||||||| ||||||| |||||| | Sbjct 335660 GAAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCACCCAGACACG 335601 Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCA 275 ||| |||||||| |||||||||| Sbjct 335600 ------GTT--------------TCGGCCGG-------------------GCCAGCATCA 335580 Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGG-AATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 | | ||| || |||| | | ||| ||||| || | ||||| | |||||||||| Sbjct 335579 AGTAGAACGG--GGTTAAAAGACTTGGGGAATGTAGCTAC-TTCGGTAG-TGTTATAGCC 335524 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAA 394 | |||| ||| || | | | ||||| | ||| || |||||||||||||| || Sbjct 335523 CTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATGCTGGCGCAA 335468 Query 395 TGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTT 454 |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 335467 TGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTA 335408 Query 455 TGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAGGGTG 512 ||||| |||||| |||||| ||||||||| | ||||| ||||||| | ||||| Sbjct 335407 CGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTCTCGGGGGTG 335351 Query 513 CACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 ||| ||||||||| || || || ||||| || |||||||| |||||||||||||||||| Sbjct 335350 CACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGAC 335291 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 335290 CCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 335231 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 335230 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 335180 >seq6 Length=2556 Score = 542 bits (600), Expect = 1e-151 Identities = 495/624 (79%), Gaps = 53/624 (8%) Strand=Plus/Plus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 |||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| ||| Sbjct 566 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCT 625 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 |||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||| Sbjct 626 AAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTT 685 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 | ||||||||| ||| || ||||||||||||||||||||||| ||||||| |||||| | Sbjct 686 GAAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCACCCAGACACG 745 Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCA 275 ||| |||||||| |||||||||| Sbjct 746 ------GTT--------------TCGGCCGG-------------------GCCAGCATCA 766 Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGG-AATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 | | ||| || |||| | | ||| ||||| || | ||||| | |||||||||| Sbjct 767 AGTAGAACGG--GGTTAAAAGACTTGGGGAATGTAGCTAC-TTCGGTAG-TGTTATAGCC 822 Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAA 394 | |||| ||| || | | | ||||| | ||| || |||||||||||||| || Sbjct 823 CTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATGCTGGCGCAA 878 Query 395 TGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTT 454 |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 879 TGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTA 938 Query 455 TGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAGGGTG 512 ||||| |||||| |||||| ||||||||| | ||||| ||||||| | ||||| Sbjct 939 CGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTCTCGGGGGTG 995 Query 513 CACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572 ||| ||||||||| || || || ||||| || |||||||| |||||||||||||||||| Sbjct 996 CACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGAC 1055 Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1056 CCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 1115 Query 633 CGCAGCGGTTCTGGCGTGCAAATC 656 || |||||||||| |||||||||| Sbjct 1116 CGTAGCGGTTCTGACGTGCAAATC 1139 Score = 396 bits (438), Expect = 1e-107 Identities = 306/360 (85%), Gaps = 9/360 (3%) Strand=Plus/Plus Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||||| |||| ||| || | | | ||||| | ||| || |||||||| Sbjct 1141 GTTATAGCCCTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATG 1196 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||||| |||||||| |||| ||||||||| |||||||||||||||||||||| ||||| Sbjct 1197 CTGGCGCAATGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 1256 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||| ||||| |||||| |||||| ||||||||| | ||||| ||||||| Sbjct 1257 GCGAGTGTACGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTC 1313 Query 506 --GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563 | |||||||| ||||||||| || || || ||||| || |||||||| ||||||||| Sbjct 1314 TCGGGGGTGCACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGC 1373 Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1374 TGTTGGGACCCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTG 1433 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1434 GTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 1493 Score = 233 bits (258), Expect = 8e-59 Identities = 140/147 (95%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 537 TCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTG 596 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct 1750 TCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATACCTG 1809 Query 597 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 1810 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATC 1869 Query 657 GATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| ||||||||||||||||||| Sbjct 1870 GATCGTCGAATTTGGGTATAGGGGCGA 1896 >seq7 Length=1235 Score = 145 bits (160), Expect = 3e-32 Identities = 85/88 (97%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 596 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 1 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAAT 60 Query 656 CGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||||||||||||||||||| Sbjct 61 CGATCGTCGAATTTGGGTATAGGGGCGA 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997876450