Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq34 587 3e-165
seq6 542 1e-151
seq7 145 3e-32
>seq34
Length=339450
Score = 587 bits (650), Expect = 3e-165
Identities = 521/651 (80%), Gaps = 53/651 (8%)
Strand=Plus/Minus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
|||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| |||
Sbjct 335780 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCT 335721
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
|||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct 335720 AAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTT 335661
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
| ||||||||| ||| || ||||||||||||||||||||||| ||||||| |||||| |
Sbjct 335660 GAAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCACCCAGACACG 335601
Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCA 275
||| |||||||| ||||||||||
Sbjct 335600 ------GTT--------------TCGGCCGG-------------------GCCAGCATCA 335580
Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGG-AATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334
| | ||| || |||| | | ||| ||||| || | ||||| | ||||||||||
Sbjct 335579 AGTAGAACGG--GGTTAAAAGACTTGGGGAATGTAGCTAC-TTCGGTAG-TGTTATAGCC 335524
Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAA 394
| |||| ||| || | | | ||||| | ||| || |||||||||||||| ||
Sbjct 335523 CTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATGCTGGCGCAA 335468
Query 395 TGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTT 454
|||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 335467 TGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTA 335408
Query 455 TGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAGGGTG 512
||||| |||||| |||||| ||||||||| | ||||| ||||||| | |||||
Sbjct 335407 CGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTCTCGGGGGTG 335351
Query 513 CACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572
||| ||||||||| || || || ||||| || |||||||| ||||||||||||||||||
Sbjct 335350 CACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGAC 335291
Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 335290 CCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 335231
Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| |||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 335230 CGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 335180
>seq6
Length=2556
Score = 542 bits (600), Expect = 1e-151
Identities = 495/624 (79%), Gaps = 53/624 (8%)
Strand=Plus/Plus
Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95
|||||||||||||||||||||||||||||||||| |||| |||||||| | ||||| |||
Sbjct 566 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAGGCT 625
Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155
|||||||||| |||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct 626 AAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGCACTTT 685
Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215
| ||||||||| ||| || ||||||||||||||||||||||| ||||||| |||||| |
Sbjct 686 GAAAAGAGAGTGAAACAGTACGTGAAATTGTTGAAAGGGAAGGGCTTGCACCCAGACACG 745
Query 216 CCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCA 275
||| |||||||| ||||||||||
Sbjct 746 ------GTT--------------TCGGCCGG-------------------GCCAGCATCA 766
Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGG-AATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334
| | ||| || |||| | | ||| ||||| || | ||||| | ||||||||||
Sbjct 767 AGTAGAACGG--GGTTAAAAGACTTGGGGAATGTAGCTAC-TTCGGTAG-TGTTATAGCC 822
Query 335 CGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAA 394
| |||| ||| || | | | ||||| | ||| || |||||||||||||| ||
Sbjct 823 CTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATGCTGGCGCAA 878
Query 395 TGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTT 454
|||||| |||| ||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 879 TGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTA 938
Query 455 TGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT--GAGGGTG 512
||||| |||||| |||||| ||||||||| | ||||| ||||||| | |||||
Sbjct 939 CGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTCTCGGGGGTG 995
Query 513 CACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGAC 572
||| ||||||||| || || || ||||| || |||||||| ||||||||||||||||||
Sbjct 996 CACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGAC 1055
Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1056 CCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 1115
Query 633 CGCAGCGGTTCTGGCGTGCAAATC 656
|| |||||||||| ||||||||||
Sbjct 1116 CGTAGCGGTTCTGACGTGCAAATC 1139
Score = 396 bits (438), Expect = 1e-107
Identities = 306/360 (85%), Gaps = 9/360 (3%)
Strand=Plus/Plus
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||||| |||| ||| || | | | ||||| | ||| || ||||||||
Sbjct 1141 GTTATAGCCCTTGGTG--ATGACCCCTGTTTTGCTTGAGGACAGCGGTCT--CTAGGATG 1196
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|||||| |||||||| |||| ||||||||| |||||||||||||||||||||| |||||
Sbjct 1197 CTGGCGCAATGGTTGCAAGCCACCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 1256
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||||| ||||| |||||| |||||| ||||||||| | ||||| |||||||
Sbjct 1257 GCGAGTGTACGGGTGAAAAACCCCTGCGCGGAATGAAAGTAA---GAGGTTGGAACCCTC 1313
Query 506 --GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGC 563
| |||||||| ||||||||| || || || ||||| || |||||||| |||||||||
Sbjct 1314 TCGGGGGTGCACAATCGACCGACCCAGAAGTGCTCGGACGGGTTTGAGTAGGAGCATAGC 1373
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1374 TGTTGGGACCCGAAAGATGGTGAACTATACCTGAATAGGGTGAAGCCAGAGGAAACTCTG 1433
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 1434 GTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 1493
Score = 233 bits (258), Expect = 8e-59
Identities = 140/147 (95%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 537 TCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTG 596
||||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1750 TCGGACGGGTTTGAGTAGGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATACCTG 1809
Query 597 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1810 AATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATC 1869
Query 657 GATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| |||||||||||||||||||
Sbjct 1870 GATCGTCGAATTTGGGTATAGGGGCGA 1896
>seq7
Length=1235
Score = 145 bits (160), Expect = 3e-32
Identities = 85/88 (97%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 596 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAAT 60
Query 656 CGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||| |||||||||||||||||||
Sbjct 61 CGATCGTCGAATTTGGGTATAGGGGCGA 88
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079997876450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |