Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq87 320 3e-85
seq34 320 3e-85
seq5 320 3e-85
seq86 232 1e-58
>seq87
Length=8252
Score = 320 bits (354), Expect = 3e-85
Identities = 233/265 (88%), Gaps = 10/265 (4%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 7842 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7901
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120
|||||||||||||||||||||||| | || ||| |||||||||| |||||||| ||||
Sbjct 7902 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 7961
Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173
||| || | || || ||| ||||||| |||||||||||||||||||||||
Sbjct 7962 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 8019
Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 8020 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 8079
Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||||||||
Sbjct 8080 ATCAAGAAAGAGCTCTCAATCTGTC 8104
>seq34
Length=339450
Score = 320 bits (354), Expect = 3e-85
Identities = 233/265 (88%), Gaps = 10/265 (4%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 336656 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 336715
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120
|||||||||||||||||||||||| | || ||| |||||||||| |||||||| ||||
Sbjct 336716 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 336775
Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173
||| || | || || ||| ||||||| |||||||||||||||||||||||
Sbjct 336776 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 336833
Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 336834 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 336893
Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||||||||
Sbjct 336894 ATCAAGAAAGAGCTCTCAATCTGTC 336918
>seq5
Length=128131
Score = 320 bits (354), Expect = 3e-85
Identities = 233/265 (88%), Gaps = 10/265 (4%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 127517 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 127458
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120
|||||||||||||||||||||||| | || ||| |||||||||| |||||||| ||||
Sbjct 127457 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 127398
Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173
||| || | || || ||| ||||||| |||||||||||||||||||||||
Sbjct 127397 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 127340
Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 127339 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 127280
Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||| ||||||||||
Sbjct 127279 ATCAAGAAAGAGCTCTCAATCTGTC 127255
>seq86
Length=4856
Score = 232 bits (256), Expect = 1e-58
Identities = 181/211 (86%), Gaps = 10/211 (5%)
Strand=Plus/Plus
Query 56 CACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
|||||||||||||||||||||||||||||| | || ||| |||||||||| ||||||||
Sbjct 3913 CACAGACCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAG 3972
Query 116 C-CAGCCACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTC 167
|||| ||| || | || || ||| ||||||| |||||||||||||||||
Sbjct 3973 TGCAGCG-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTC 4030
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4031 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 4090
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| | ||||||||||||||| ||||||||||
Sbjct 4091 CACAAAATCAAGAAAGAGCTCTCAATCTGTC 4121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799235819
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