Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq87 320 3e-85 seq34 320 3e-85 seq5 320 3e-85 seq86 232 1e-58 >seq87 Length=8252 Score = 320 bits (354), Expect = 3e-85 Identities = 233/265 (88%), Gaps = 10/265 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7842 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7901 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120 |||||||||||||||||||||||| | || ||| |||||||||| |||||||| |||| Sbjct 7902 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 7961 Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 ||| || | || || ||| ||||||| ||||||||||||||||||||||| Sbjct 7962 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 8019 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 8020 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 8079 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||| Sbjct 8080 ATCAAGAAAGAGCTCTCAATCTGTC 8104 >seq34 Length=339450 Score = 320 bits (354), Expect = 3e-85 Identities = 233/265 (88%), Gaps = 10/265 (4%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 336656 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 336715 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120 |||||||||||||||||||||||| | || ||| |||||||||| |||||||| |||| Sbjct 336716 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 336775 Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 ||| || | || || ||| ||||||| ||||||||||||||||||||||| Sbjct 336776 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 336833 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 336834 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 336893 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||| Sbjct 336894 ATCAAGAAAGAGCTCTCAATCTGTC 336918 >seq5 Length=128131 Score = 320 bits (354), Expect = 3e-85 Identities = 233/265 (88%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 127517 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 127458 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-CAGC 120 |||||||||||||||||||||||| | || ||| |||||||||| |||||||| |||| Sbjct 127457 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGTGCAGC 127398 Query 121 CACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 ||| || | || || ||| ||||||| ||||||||||||||||||||||| Sbjct 127397 G-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTCGTTATC 127340 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 127339 GCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAA 127280 Query 234 ATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||| |||||||||| Sbjct 127279 ATCAAGAAAGAGCTCTCAATCTGTC 127255 >seq86 Length=4856 Score = 232 bits (256), Expect = 1e-58 Identities = 181/211 (86%), Gaps = 10/211 (5%) Strand=Plus/Plus Query 56 CACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||||||||||||||||||||||||||||| | || ||| |||||||||| |||||||| Sbjct 3913 CACAGACCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAG 3972 Query 116 C-CAGCCACCA--ACCATAGTCGATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTC 167 |||| ||| || | || || ||| ||||||| ||||||||||||||||| Sbjct 3973 TGCAGCG-CCAGCACAAGAGGCGCGCTGGCAGCACTATTTAG-AGGTTAAGGTCTCGTTC 4030 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4031 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 4090 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || | ||||||||||||||| |||||||||| Sbjct 4091 CACAAAATCAAGAAAGAGCTCTCAATCTGTC 4121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799235819