Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq87 468 9e-130 seq34 468 9e-130 >seq87 Length=8252 Score = 468 bits (518), Expect = 9e-130 Identities = 282/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||| |||| | |||||| ||||||||||||||||||||||||||| Sbjct 4018 TACTAAGTTCAATTACTATTGCAACAACGGTCCATCAGTAGGGTAAAACTAACCTGTCTC 3959 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3958 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 3899 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 3898 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTA 3839 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3838 TGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 3779 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3778 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 3723 >seq34 Length=339450 Score = 468 bits (518), Expect = 9e-130 Identities = 282/296 (95%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| |||||| |||| | |||||| ||||||||||||||||||||||||||| Sbjct 333111 TACTAAGTTCAATTACTATTGCAACAACGGTCCATCAGTAGGGTAAAACTAACCTGTCTC 333170 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333171 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 333230 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 333231 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTA 333290 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333291 TGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 333350 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333351 TCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 333406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399154144