Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq87 100 2e-19
seq34 100 2e-19
seq5 100 2e-19
>seq87
Length=8252
Score = 100 bits (110), Expect = 2e-19
Identities = 69/74 (93%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 7660 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 7717
Query 109 TAATACAACGCAAG 122
|||| |||||||||
Sbjct 7718 TAAT-CAACGCAAG 7730
>seq34
Length=339450
Score = 100 bits (110), Expect = 2e-19
Identities = 69/74 (93%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 336474 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 336531
Query 109 TAATACAACGCAAG 122
|||| |||||||||
Sbjct 336532 TAAT-CAACGCAAG 336544
>seq5
Length=128131
Score = 100 bits (110), Expect = 2e-19
Identities = 69/74 (93%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 127699 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 127642
Query 109 TAATACAACGCAAG 122
|||| |||||||||
Sbjct 127641 TAAT-CAACGCAAG 127629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300799720820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |