Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq98 307 2e-81 seq93 163 5e-38 >seq98 Length=546 Score = 307 bits (340), Expect = 2e-81 Identities = 237/279 (85%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||||||||||||||||| | |||| || ||||||||||||||||||| Sbjct 410 CCCACGCTTTCGAGCCTCAGCGTCAGTTACAGACCAGAAAGCCGCCTTCGCCACTGGTGT 351 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||||||||||||||||||||| |||||||| || ||||| | |||| Sbjct 350 TCCTCCATATATCTACGCATTTCACCGCTACACATGGAATTCCACTTTCCTCTTCTGCAC 291 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCT-ATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| |||| | || ||||||||| | ||||||||| ||| Sbjct 290 TCAAGTCTCCCAGTTTCCAATG-ACCCTCCCCGGTTGAGCCGTGGGCTTTCACATCAGAC 232 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | | |||||| | | | |||||| ||||||||||||||| |||||||||||||||| Sbjct 231 TTATCATTCCGCCTGCGCTCGCTTTACGCCCAATAAATCCGGACAACGCTTGCCACCTAC 172 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||||||| ||| Sbjct 171 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGACTT 133 >seq93 Length=600 Score = 163 bits (180), Expect = 5e-38 Identities = 207/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 |||||||| |||| |||||| | | |||||| || |||||| |||||||| | Sbjct 527 GCTTTCGCCTATCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 468 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| |||||| |||| || | | |||| || Sbjct 467 CCGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACCGTACTCCAG 408 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||||| Sbjct 407 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAA 348 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 347 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 288 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||||||| || Sbjct 287 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATA 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828799205129