Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq93 320 5e-85
seq98 149 2e-33
>seq93
Length=600
Score = 320 bits (354), Expect = 5e-85
Identities = 278/343 (81%), Gaps = 3/343 (1%)
Strand=Plus/Plus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
||||||||||||||| |||||| ||| || |||||||||||| | |||||||||| |
Sbjct 15 CGCGTCTGATTAGCTCGTTGGTGAGGCAATAGCTTACCAAGGCTATGATCAGTAGCTGGT 74
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 75 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 134
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||
Sbjct 135 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 194
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| |||||||| || ||| | ||| ||||| |||||||||| ||||||
Sbjct 195 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAAT 254
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 255 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 314
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || | |||||
Sbjct 315 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 356
>seq98
Length=546
Score = 149 bits (164), Expect = 2e-33
Identities = 173/234 (74%), Gaps = 26/234 (11%)
Strand=Plus/Plus
Query 292 TTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGT 351
|| |||||||| | ||| |||||| |||||||||||||||| || ||||| ||||| |
Sbjct 2 TTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGAT 61
Query 352 CGTAAAGCTCTGTCCTC-------AAGGA-AGA-----TAA------------TGACGGT 386
||||||||||||| | ||||| ||| ||| |||||||
Sbjct 62 CGTAAAGCTCTGTTGTTGGTGAAGAAGGATAGAGGCAGTAACTGGTCTTTATTTGACGGT 121
Query 387 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCT 446
| | | || ||| | |||||||||||||||||||||||||||||||||||||| |||
Sbjct 122 AATCAACCAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCA 181
Query 447 AGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||||| |||||| ||| | |||||||||| | ||| ||| || | ||||||
Sbjct 182 AGCGTTGTCCGGATTTA-TTGGGCGTAAAGCGAGCGCAGGCGGAATGATAAGTC 234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497598517376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |