Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq87 347 2e-93 seq34 347 2e-93 seq5 347 2e-93 seq86 91.5 3e-16 >seq87 Length=8252 Score = 347 bits (384), Expect = 2e-93 Identities = 273/318 (86%), Gaps = 14/318 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71 || |||||||||||||| |||||||| |||| || || ||| || || ||| | Sbjct 8013 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 7956 Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||| |||||||| | || ||| |||||||||||||||||||||||||||||||| Sbjct 7955 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 7896 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| | Sbjct 7895 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 7839 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct 7838 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 7779 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| ||||||||||||||||||| |||||||||||| |||| || | ||||||||| Sbjct 7778 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 7719 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 7718 ACGTCCCTGCCCTTTGTA 7701 >seq34 Length=339450 Score = 347 bits (384), Expect = 2e-93 Identities = 273/318 (86%), Gaps = 14/318 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71 || |||||||||||||| |||||||| |||| || || ||| || || ||| | Sbjct 336827 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 336770 Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||| |||||||| | || ||| |||||||||||||||||||||||||||||||| Sbjct 336769 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 336710 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| | Sbjct 336709 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 336653 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct 336652 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 336593 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| ||||||||||||||||||| |||||||||||| |||| || | ||||||||| Sbjct 336592 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 336533 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 336532 ACGTCCCTGCCCTTTGTA 336515 >seq5 Length=128131 Score = 347 bits (384), Expect = 2e-93 Identities = 273/318 (86%), Gaps = 14/318 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71 || |||||||||||||| |||||||| |||| || || ||| || || ||| | Sbjct 127346 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 127403 Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||| |||||||| | || ||| |||||||||||||||||||||||||||||||| Sbjct 127404 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 127463 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| | Sbjct 127464 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 127520 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct 127521 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 127580 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| ||||||||||||||||||| |||||||||||| |||| || | ||||||||| Sbjct 127581 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 127640 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 127641 ACGTCCCTGCCCTTTGTA 127658 >seq86 Length=4856 Score = 91.5 bits (100), Expect = 3e-16 Identities = 97/120 (81%), Gaps = 11/120 (9%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71 || |||||||||||||| |||||||| |||| || || ||| || || ||| | Sbjct 4030 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 3973 Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||| |||||||| | || ||| |||||||||||||||||||||||||||||||| Sbjct 3972 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 3913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199062272