Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq87 347 2e-93
seq34 347 2e-93
seq5 347 2e-93
seq86 91.5 3e-16
>seq87
Length=8252
Score = 347 bits (384), Expect = 2e-93
Identities = 273/318 (86%), Gaps = 14/318 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71
|| |||||||||||||| |||||||| |||| || || ||| || || ||| |
Sbjct 8013 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 7956
Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||||
Sbjct 7955 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 7896
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |
Sbjct 7895 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 7839
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct 7838 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 7779
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| ||||||||||||||||||| |||||||||||| |||| || | |||||||||
Sbjct 7778 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 7719
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 7718 ACGTCCCTGCCCTTTGTA 7701
>seq34
Length=339450
Score = 347 bits (384), Expect = 2e-93
Identities = 273/318 (86%), Gaps = 14/318 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71
|| |||||||||||||| |||||||| |||| || || ||| || || ||| |
Sbjct 336827 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 336770
Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||||
Sbjct 336769 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 336710
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |
Sbjct 336709 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 336653
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct 336652 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 336593
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| ||||||||||||||||||| |||||||||||| |||| || | |||||||||
Sbjct 336592 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 336533
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 336532 ACGTCCCTGCCCTTTGTA 336515
>seq5
Length=128131
Score = 347 bits (384), Expect = 2e-93
Identities = 273/318 (86%), Gaps = 14/318 (4%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71
|| |||||||||||||| |||||||| |||| || || ||| || || ||| |
Sbjct 127346 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 127403
Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||||
Sbjct 127404 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 127463
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |
Sbjct 127464 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTTGA--- 127520
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||||||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct 127521 CCTTGGCCGAGAGGCCTGGGAAATCTTGGGAAACTCCGTCGTGCTGGGGATAGAGCATTG 127580
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| ||||||||||||||||||| |||||||||||| |||| || | |||||||||
Sbjct 127581 CAATTGTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCACCAACTTGCGTTGATT 127640
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 127641 ACGTCCCTGCCCTTTGTA 127658
>seq86
Length=4856
Score = 91.5 bits (100), Expect = 3e-16
Identities = 97/120 (81%), Gaps = 11/120 (9%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG-----CCAG-GC-CCGCTTTGGCGGGTCGCCGG- 71
|| |||||||||||||| |||||||| |||| || || ||| || || ||| |
Sbjct 4030 GAACGAGACCTTAACCT-CTAAATAGTGCTGCCAGCGCGCCTCTTGTGCTGG-CGCTGCA 3973
Query 72 CTTCTTAGAGGGACTATCGGCTC-AAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||| |||||||| | || ||| ||||||||||||||||||||||||||||||||
Sbjct 3972 CTTCTTAGGGGGACTATTGACTTGAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 3913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199062272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |