Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30] 99 sequences; 12,498,763 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq34 704 0.0 seq86 677 0.0 seq90 515 1e-143 seq87 223 1e-55 >seq34 Length=339450 Score = 704 bits (780), Expect = 0.0 Identities = 479/537 (89%), Gaps = 16/537 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 333438 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 333497 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct 333498 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGGAC--GGA-- 333553 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||| | || || ||||| ||||| | |||||| || ||||| | Sbjct 333554 -------GAAAAAATGCAAAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCA 333604 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 333605 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 333661 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 333662 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 333721 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 333722 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 333781 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333782 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 333841 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333842 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 333901 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 333902 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 333958 >seq86 Length=4856 Score = 677 bits (750), Expect = 0.0 Identities = 463/519 (89%), Gaps = 17/519 (3%) Strand=Plus/Plus Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1 TTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATCGTTTAACAGATGTGCCGC 60 Query 85 CCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTA 144 ||||||||||||||||||||||||||||| | || ||| ||| | | Sbjct 61 CCCAGCCAAACTCCCCACCTGACAATGTCTTGGAC--GGA---------GAAAAAATGCA 109 Query 145 ACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATA 204 | || ||||| ||||| | |||||| || ||||| | ||||||||||||| || Sbjct 110 AAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCAGTAAGTAAAAAAACAATG 167 Query 205 AGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTC 264 |||||||||||||||| |||||||| |||||||||||||||||||| || ||| Sbjct 168 GAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTCTACACCCTCCATGTC 224 Query 265 ATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC 324 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 225 TTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGC 284 Query 325 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 384 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 285 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG-ACAGTGGGAATCTCG 343 Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 344 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 403 Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 404 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 463 Query 505 CACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||| Sbjct 464 CACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 502 >seq90 Length=4484 Score = 515 bits (570), Expect = 1e-143 Identities = 299/308 (97%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 |||||||||||||||||||| || ||| |||||||| ||| |||||||||||||||| Sbjct 789 GCTCCCACTTATTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCA 730 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 729 ACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 670 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 669 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 610 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 550 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 549 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 490 Query 536 ACTTTCTG 543 |||||||| Sbjct 489 ACTTTCTG 482 >seq87 Length=8252 Score = 223 bits (246), Expect = 1e-55 Identities = 198/248 (80%), Gaps = 16/248 (6%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3691 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 3632 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3631 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC-----------TT 3583 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || | | ||| | || || ||||| ||||| | |||||| || ||||| | Sbjct 3582 GGACGGAGAAAAAATGCAAAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCA 3525 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| || |||||||||||||||| |||||||| ||||||||||| Sbjct 3524 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 3468 Query 247 TTCTACAC 254 |||||||| Sbjct 3467 TTCTACAC 3460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198381152