Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20auris_20[genbank_20GCA_5F001189475.1_202015-07-30]
99 sequences; 12,498,763 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq34 704 0.0
seq86 677 0.0
seq90 515 1e-143
seq87 223 1e-55
>seq34
Length=339450
Score = 704 bits (780), Expect = 0.0
Identities = 479/537 (89%), Gaps = 16/537 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || || |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 333438 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 333497
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct 333498 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTGGAC--GGA-- 333553
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||| | || || ||||| ||||| | |||||| || ||||| |
Sbjct 333554 -------GAAAAAATGCAAAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCA 333604
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| || |||||||||||||||| |||||||| |||||||||||
Sbjct 333605 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 333661
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||| || ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 333662 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 333721
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333722 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 333781
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333782 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 333841
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333842 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 333901
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333902 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 333958
>seq86
Length=4856
Score = 677 bits (750), Expect = 0.0
Identities = 463/519 (89%), Gaps = 17/519 (3%)
Strand=Plus/Plus
Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 TTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATCGTTTAACAGATGTGCCGC 60
Query 85 CCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTA 144
||||||||||||||||||||||||||||| | || ||| ||| | |
Sbjct 61 CCCAGCCAAACTCCCCACCTGACAATGTCTTGGAC--GGA---------GAAAAAATGCA 109
Query 145 ACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATA 204
| || ||||| ||||| | |||||| || ||||| | ||||||||||||| ||
Sbjct 110 AAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCAGTAAGTAAAAAAACAATG 167
Query 205 AGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTC 264
|||||||||||||||| |||||||| |||||||||||||||||||| || |||
Sbjct 168 GAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTCTACACCCTCCATGTC 224
Query 265 ATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGC 324
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 225 TTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGC 284
Query 325 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 384
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 285 CAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG-ACAGTGGGAATCTCG 343
Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGT 403
Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 463
Query 505 CACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||
Sbjct 464 CACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 502
>seq90
Length=4484
Score = 515 bits (570), Expect = 1e-143
Identities = 299/308 (97%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
|||||||||||||||||||| || ||| |||||||| ||| ||||||||||||||||
Sbjct 789 GCTCCCACTTATTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCA 730
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 729 ACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 670
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 610
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 550
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 490
Query 536 ACTTTCTG 543
||||||||
Sbjct 489 ACTTTCTG 482
>seq87
Length=8252
Score = 223 bits (246), Expect = 1e-55
Identities = 198/248 (80%), Gaps = 16/248 (6%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || || |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3691 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATC 3632
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3631 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC-----------TT 3583
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
|| | | ||| | || || ||||| ||||| | |||||| || ||||| |
Sbjct 3582 GGACGGAGAAAAAATGCAAAGCAAGAAATTGGTC--TCGCGACCAGCTCTCCTTCACCCA 3525
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| || |||||||||||||||| |||||||| |||||||||||
Sbjct 3524 GTAAGTAAAAAAACAATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 3468
Query 247 TTCTACAC 254
||||||||
Sbjct 3467 TTCTACAC 3460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635198381152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |