Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20glabrata_20[genbank_20GCA_5F001466685.1_202015-12-
15] 189 sequences; 12,820,484 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq23 677 0.0
>seq23
Length=11123
Score = 677 bits (750), Expect = 0.0
Identities = 557/671 (83%), Gaps = 28/671 (4%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| |||||||||||||||||||||||||||||| |||| |||||||| | ||||||||
Sbjct 3366 TCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGC 3307
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
|||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 3306 TAAATACAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 3247
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214
|| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| |
Sbjct 3246 TGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACAT 3187
Query 215 GCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGT--GCACTCTTCTGCGGTCA---GGCCA 269
| |||| | | ||| |||| | | | ||||| | | ||| |||||
Sbjct 3186 GGTGTT--TTGCGCCCCTTGCCTCTCGTGGGCTTGGGACTCT-CGCAGCTCACTGGGCCA 3130
Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC---CTTCGGGGG--- 323
||||| | | ||||| |||| ||| || ||||||||||| | | |||| |
Sbjct 3129 GCATCGGTTTTGGCGGCCGGAAAAAA-CCTAGGGAATGTGGCTCTGCGCCTCGGTGTAGA 3071
Query 324 GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG-----C 378
|||||||||||| ||| |||| ||||| ||| |||| |||| | ||| | | |
Sbjct 3070 GTGTTATAGCCCTGGG--GAATACGGCCAGCCGGGACCGAGGACTGCGATACTTGTTATC 3013
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||||||||| |||||||| || || |||||||||| |||||||||||||||||||||
Sbjct 3012 TAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 2953
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
| ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||
Sbjct 2952 CGTCTATGCGAGTGTTTGGGTGTTAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGG 2893
Query 499 AACCCGTGA------GGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 552
||| | |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2892 GGCCCTCCACCTGGGGGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGT 2833
Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2832 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 2773
Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672
|||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||
Sbjct 2772 AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGG 2713
Query 673 TATAGGGGCGA 683
|||||||||||
Sbjct 2712 TATAGGGGCGA 2702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079995945950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |