Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20glabrata_20[genbank_20GCA_5F002219185.1_202017-07- 14] 19 sequences; 12,729,188 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq17 396 5e-108 seq13 396 5e-108 >seq17 Length=23113 Score = 396 bits (438), Expect = 5e-108 Identities = 275/307 (90%), Gaps = 5/307 (2%) Strand=Plus/Plus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 |||||||||||||||||| | || || | |||| ||| | || ||| || ||||||| Sbjct 14254 CCGGGCCTTTCCTTCTGGCTAACCCCAAGTCCTTG--TGGCT-TGGCGGCGAACCAGGAC 14310 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATG 131 |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| Sbjct 14311 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATG 14370 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 14371 GAATAATGGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 14430 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 14431 AATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 14490 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 14491 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 14549 Query 312 TTAGGGG 318 ||||||| Sbjct 14550 TTAGGGG 14556 >seq13 Length=1424660 Score = 396 bits (438), Expect = 5e-108 Identities = 275/307 (90%), Gaps = 5/307 (2%) Strand=Plus/Minus Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 |||||||||||||||||| | || || | |||| ||| | || ||| || ||||||| Sbjct 1423321 CCGGGCCTTTCCTTCTGGCTAACCCCAAGTCCTTG--TGGCT-TGGCGGCGAACCAGGAC 1423265 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATG 131 |||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||| Sbjct 1423264 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATG 1423205 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 1423204 GAATAATGGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 1423145 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1423144 AATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 1423085 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||||||||||||||||||| || ||||||| |||||||||||||| ||||||||| Sbjct 1423084 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 1423026 Query 312 TTAGGGG 318 ||||||| Sbjct 1423025 TTAGGGG 1423019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199826112