Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20glabrata_20[genbank_20GCA_5F002219195.1_202017-07-
14] 24 sequences; 12,728,164 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq21 396 5e-108
seq14 396 5e-108
>seq21
Length=19077
Score = 396 bits (438), Expect = 5e-108
Identities = 275/307 (90%), Gaps = 5/307 (2%)
Strand=Plus/Minus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
|||||||||||||||||| | || || | |||| ||| | || ||| || |||||||
Sbjct 4825 CCGGGCCTTTCCTTCTGGCTAACCCCAAGTCCTTG--TGGCT-TGGCGGCGAACCAGGAC 4769
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATG 131
|||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct 4768 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATG 4709
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 4708 GAATAATGGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 4649
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4648 AATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 4589
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||
Sbjct 4588 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 4530
Query 312 TTAGGGG 318
|||||||
Sbjct 4529 TTAGGGG 4523
>seq14
Length=1419287
Score = 396 bits (438), Expect = 5e-108
Identities = 275/307 (90%), Gaps = 5/307 (2%)
Strand=Plus/Minus
Query 13 CCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72
|||||||||||||||||| | || || | |||| ||| | || ||| || |||||||
Sbjct 1417948 CCGGGCCTTTCCTTCTGGCTAACCCCAAGTCCTTG--TGGCT-TGGCGGCGAACCAGGAC 1417892
Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATG 131
|||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct 1417891 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATG 1417832
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191
||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 1417831 GAATAATGGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATT 1417772
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1417771 AATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 1417712
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311
|||||||||||||||||||||| || ||||||| |||||||||||||| |||||||||
Sbjct 1417711 GAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAG 1417653
Query 312 TTAGGGG 318
|||||||
Sbjct 1417652 TTAGGGG 1417646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199780352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |