Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20glabrata_20[genbank_20GCA_5F002219195.1_202017-07-
14] 24 sequences; 12,728,164 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq21 396 5e-108
seq14 396 5e-108
seq13 370 2e-100
>seq21
Length=19077
Score = 396 bits (438), Expect = 5e-108
Identities = 275/310 (89%), Gaps = 3/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||| || || || || ||| | | ||||||||
Sbjct 4186 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTGTCCACTTCTTAG 4127
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4126 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4067
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| ||||| | |||||||||
Sbjct 4066 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 4009
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 4008 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 3949
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 3948 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 3889
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 3888 GCCCTTTGTA 3879
>seq14
Length=1419287
Score = 396 bits (438), Expect = 5e-108
Identities = 275/310 (89%), Gaps = 3/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||| || || || || ||| | | ||||||||
Sbjct 1417309 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTGTCCACTTCTTAG 1417250
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1417249 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1417190
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| ||||| | |||||||||
Sbjct 1417189 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 1417132
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||| ||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 1417131 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1417072
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 1417071 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1417012
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 1417011 GCCCTTTGTA 1417002
>seq13
Length=1176450
Score = 370 bits (410), Expect = 2e-100
Identities = 249/276 (90%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 54 GCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGA 112
|| || || ||| | | |||||||||||||||||||| | |||||||||||||||||||
Sbjct 1176443 GCATTTGCTGGTTGTCCACTTCTTAGAGGGACTATCGGTTTCAAGCCGATGGAAGTTTGA 1176384
Query 113 GGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACA 172
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1176383 GGCAATAACAGGTCTGTGATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACG 1176324
Query 173 GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGT 232
|||||| ||||| | |||||||||| |||||| ||||||||||| |||||| |||||
Sbjct 1176323 GAGCCAGCGAGTCTA--ACCTTGGCCGAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGT 1176266
Query 233 GCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||
Sbjct 1176265 GCTGGGGATAGAGCATTGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGT 1176206
Query 293 CATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||||| |||||||||||||||||||||||||||
Sbjct 1176205 CATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 1176170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199772672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |