Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5 279 8e-73 seq1 279 8e-73 >seq5 Length=1965937 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1963619 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1963676 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| |||||| Sbjct 1963677 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1963736 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| | ||||| || | | ||||||||||||||||||| Sbjct 1963737 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1963793 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1963794 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1963842 >seq1 Length=2919042 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 7883 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 7826 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| |||||| Sbjct 7825 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 7766 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| | ||||| || | | ||||||||||||||||||| Sbjct 7765 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 7709 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 7708 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 7660 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1319252 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1319309 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| |||||| Sbjct 1319310 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1319369 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| | ||||| || | | ||||||||||||||||||| Sbjct 1319370 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1319426 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1319427 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1319475 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1325621 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1325564 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| |||||| Sbjct 1325563 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1325504 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| | ||||| || | | ||||||||||||||||||| Sbjct 1325503 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1325447 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1325446 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1325398 Score = 273 bits (302), Expect = 3e-71 Identities = 202/230 (88%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 10215 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 10158 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| |||||| Sbjct 10157 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 10098 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| | ||||| || | | ||||||||||||||||||| Sbjct 10097 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 10041 Query 180 GCCCAGAA-CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 10040 GCCCAGAAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 9991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999941720