Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq5 279 8e-73
seq1 279 8e-73
>seq5
Length=1965937
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1963619 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1963676
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 1963677 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1963736
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 1963737 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1963793
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1963794 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1963842
>seq1
Length=2919042
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 7883 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 7826
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 7825 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 7766
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 7765 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 7709
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 7708 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 7660
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1319252 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1319309
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 1319310 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1319369
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 1319370 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1319426
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1319427 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1319475
Score = 279 bits (308), Expect = 8e-73
Identities = 202/229 (88%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 1325621 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 1325564
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 1325563 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 1325504
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 1325503 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 1325447
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1325446 GCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1325398
Score = 273 bits (302), Expect = 3e-71
Identities = 202/230 (88%), Gaps = 7/230 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 10215 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 10158
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | |||| ||||||
Sbjct 10157 CTCGTTGAAGAGCAAAAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTCTCAAGATT 10098
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||||| ||||||||||| | ||||| || | | |||||||||||||||||||
Sbjct 10097 TCCCAGACCTCTCGGCCAAGGTCA---ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 10041
Query 180 GCCCAGAA-CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 10040 GCCCAGAAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 9991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751999941720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |