Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5 320 3e-85 seq1 320 3e-85 >seq5 Length=1965937 Score = 320 bits (354), Expect = 3e-85 Identities = 221/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||||||| |||| |||||||||||||||||| | ||| |||| |||||| Sbjct 1964509 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1964450 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 1964449 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1964390 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 1964389 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1964330 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct 1964329 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1964271 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 1964270 AGTTAGGGG 1964262 >seq1 Length=2919042 Score = 320 bits (354), Expect = 3e-85 Identities = 221/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||||||| |||| |||||||||||||||||| | ||| |||| |||||| Sbjct 6993 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 7052 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 7053 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 7112 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 7113 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 7172 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct 7173 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 7231 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 7232 AGTTAGGGG 7240 Score = 320 bits (354), Expect = 3e-85 Identities = 221/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||||||| |||| |||||||||||||||||| | ||| |||| |||||| Sbjct 1320141 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1320082 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 1320081 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1320022 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 1320021 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1319962 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct 1319961 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1319903 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 1319902 AGTTAGGGG 1319894 Score = 320 bits (354), Expect = 3e-85 Identities = 221/249 (89%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||||||| |||| |||||||||||||||||| | ||| |||| |||||| Sbjct 1324731 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1324790 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 1324791 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1324850 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 1324851 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1324910 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 ||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| Sbjct 1324911 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1324969 Query 310 AGTTAGGGG 318 ||||||||| Sbjct 1324970 AGTTAGGGG 1324978 Score = 156 bits (172), Expect = 8e-36 Identities = 103/113 (91%), Gaps = 1/113 (1%) Strand=Plus/Plus Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265 |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 9461 GGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACT 9520 Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| || ||||||| |||||||||||||| |||||||||||||||| Sbjct 9521 GCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 9572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199926784