Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq5 320 3e-85
seq1 320 3e-85
>seq5
Length=1965937
Score = 320 bits (354), Expect = 3e-85
Identities = 221/249 (89%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
|||| ||||||||| |||| |||||||||||||||||| | ||| |||| ||||||
Sbjct 1964509 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1964450
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1964449 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1964390
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1964389 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1964330
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||
Sbjct 1964329 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1964271
Query 310 AGTTAGGGG 318
|||||||||
Sbjct 1964270 AGTTAGGGG 1964262
>seq1
Length=2919042
Score = 320 bits (354), Expect = 3e-85
Identities = 221/249 (89%), Gaps = 1/249 (0%)
Strand=Plus/Plus
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
|||| ||||||||| |||| |||||||||||||||||| | ||| |||| ||||||
Sbjct 6993 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 7052
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 7053 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 7112
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 7113 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 7172
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||
Sbjct 7173 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 7231
Query 310 AGTTAGGGG 318
|||||||||
Sbjct 7232 AGTTAGGGG 7240
Score = 320 bits (354), Expect = 3e-85
Identities = 221/249 (89%), Gaps = 1/249 (0%)
Strand=Plus/Minus
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
|||| ||||||||| |||| |||||||||||||||||| | ||| |||| ||||||
Sbjct 1320141 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1320082
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1320081 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1320022
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1320021 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1319962
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||
Sbjct 1319961 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1319903
Query 310 AGTTAGGGG 318
|||||||||
Sbjct 1319902 AGTTAGGGG 1319894
Score = 320 bits (354), Expect = 3e-85
Identities = 221/249 (89%), Gaps = 1/249 (0%)
Strand=Plus/Plus
Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129
|||| ||||||||| |||| |||||||||||||||||| | ||| |||| ||||||
Sbjct 1324731 GACTATTACTTTGAGTAAATGAGAGTGTTCAAAGCAGGCGTACGCTTGAATCTGTTAGCA 1324790
Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1324791 TGGAATAATAGAATAGGACGCATGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGA 1324850
Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 1324851 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 1324910
Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309
||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||
Sbjct 1324911 CTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAA 1324969
Query 310 AGTTAGGGG 318
|||||||||
Sbjct 1324970 AGTTAGGGG 1324978
Score = 156 bits (172), Expect = 8e-36
Identities = 103/113 (91%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265
|||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 9461 GGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTACT 9520
Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||| || ||||||| |||||||||||||| ||||||||||||||||
Sbjct 9521 GCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 9572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199926784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |