Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11- 25] 8 sequences; 13,162,108 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5 324 2e-86 seq1 324 2e-86 >seq5 Length=1965937 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1963761 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1963820 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 1963821 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1963880 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 1963881 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1963937 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1963938 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1963997 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1963998 AAAGAGCTCTCAATCTGTC 1964016 >seq1 Length=2919042 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 7741 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7682 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 7681 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 7622 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 7621 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 7565 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 7564 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 7505 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 7504 AAAGAGCTCTCAATCTGTC 7486 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1319394 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1319453 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 1319454 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1319513 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 1319514 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1319570 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1319571 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1319630 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1319631 AAAGAGCTCTCAATCTGTC 1319649 Score = 324 bits (358), Expect = 2e-86 Identities = 230/259 (89%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1325479 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1325420 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119 |||||||||||||||||||||||| | || ||| |||||||||| ||||||||| | Sbjct 1325419 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1325360 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 ||| ||| || | | | |||||||| |||||||||||||||||||||||| |||| Sbjct 1325359 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1325303 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1325302 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1325243 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1325242 AAAGAGCTCTCAATCTGTC 1325224 Score = 316 bits (350), Expect = 3e-84 Identities = 230/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAA-CATCTAAGGGCATCACAG 60 ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 10073 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAAACGTCTAAGGGCATCACAG 10014 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-- 118 ||||||||||||||||||||||||| | || ||| |||||||||| ||||||||| Sbjct 10013 ACCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTC 9954 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 |||| ||| || | | | |||||||| |||||||||||||||||||||||| ||| Sbjct 9953 GCCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAAT 9897 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 9896 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 9837 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 9836 GAAAGAGCTCTCAATCTGTC 9817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799938248