Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: _5BCandida_5D_20intermedia_20[genbank_20GCA_5F900106115.1_202016-11-
25] 8 sequences; 13,162,108 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq5 324 2e-86
seq1 324 2e-86
>seq5
Length=1965937
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1963761 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1963820
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 1963821 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1963880
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 1963881 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1963937
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1963938 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1963997
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1963998 AAAGAGCTCTCAATCTGTC 1964016
>seq1
Length=2919042
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 7741 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 7682
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 7681 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 7622
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 7621 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 7565
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 7564 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 7505
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 7504 AAAGAGCTCTCAATCTGTC 7486
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1319394 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1319453
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 1319454 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1319513
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 1319514 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1319570
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1319571 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1319630
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1319631 AAAGAGCTCTCAATCTGTC 1319649
Score = 324 bits (358), Expect = 2e-86
Identities = 230/259 (89%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1325479 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 1325420
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--G 119
|||||||||||||||||||||||| | || ||| |||||||||| ||||||||| |
Sbjct 1325419 CCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTCG 1325360
Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| ||| || | | | |||||||| |||||||||||||||||||||||| ||||
Sbjct 1325359 CCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAATT 1325303
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1325302 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1325243
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 1325242 AAAGAGCTCTCAATCTGTC 1325224
Score = 316 bits (350), Expect = 3e-84
Identities = 230/260 (88%), Gaps = 6/260 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAA-CATCTAAGGGCATCACAG 60
||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 10073 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAAACGTCTAAGGGCATCACAG 10014
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA-- 118
||||||||||||||||||||||||| | || ||| |||||||||| |||||||||
Sbjct 10013 ACCTGTTATTGCCTCAAACTTCCATCGACTTCAAGTCAATAGTCCCCCTAAGAAGCGCTC 9954
Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
|||| ||| || | | | |||||||| |||||||||||||||||||||||| |||
Sbjct 9953 GCCAGCAAA-ATGCTA-ACAGCCCTATTTAG-AGGTTAAGGTCTCGTTCGTTATCGCAAT 9897
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 9896 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 9837
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||||||||||
Sbjct 9836 GAAAGAGCTCTCAATCTGTC 9817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796799938248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |